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Information for unigene UN25982
| FASTA Sequence |
| Unigene ID: UN25982 | Length: 852 |
| SNP | GGAAAGAAATCTGTTTCCTCCTTCTCAACTGAAACTTCTTCAGCGGATCTGAATCATTTCGACTCAAAATTACAAGGAAGAGAAGG
GAAGGGAAAGAAGAATCAATCATGGGTTGGATCGGAGAAACAATGGATTCCATCAAATCAATCAAGATCCGTCAGCTTCTCACTCA
GGCCGTCACCCTCGGTATGATAGTGACGTCGGCATTGATAATATGGAAGGGGTTGATGTGTGTGACTGGCACTGAATCTCCAGTTG
TCGTTGTTCTCTCTGGAAGCATGGAACCTGGCTTTCAGCGAGGGGATATATTGTTCTTGACCATGACCAAAGAGCCCATTAGAACA
GGCGAGATTGTTGTTTTCAAAATTGATGGTCGTGATATACCCATCGTCCATCGTGCTATCGAAGTCCATGAGAGGAAATCTACTGG
AGCAGTTGATGTTCTAACAAAAGGTGACAACAACGAGGTGGATGACATCGGTCTCTATGCTGATGGACAAATGTGGCTTCATCGTC
ACCATATAATGGGCAGAGCTGTTGCGTTCTTGCCTTATGTTGGATGGGTGACAATTATCATGACAGAAAAGCCTATCATCAAGTAT
ATACTCATTGGTGCGTTGGGTCTGCTCGTTATAACATCCAAAGACTGAGACAACAATACATAAAGACGGGTCTATGGTGGTGGTGG
GGAAGTGGCTCCTGCAAGTGCAACCCTCATCATCTTTTGAACTCATTCCTTAAACCAAAGAAACTAAACCAATTTTATAATGGAAT
TTTAGAATCTTATAATCCAAATTTAATAAATGTATAAGTTTTGGTAAATTAGCAATGCTTTTTATAACAATTCTTTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566523 signal peptidase, endoplasmic reticulum-type [Arabidopsis thaliana] | 817 | 3e-085 |
| XP_002885105 hypothetical protein ARALYDRAFT_479026 [Arabidopsis lyrata subsp. lyrata] | 815 | 6e-085 |
| NP_175669 signal peptidase, endoplasmic reticulum-type [Arabidopsis thaliana] | 804 | 1e-083 |
| BAD94864 hypothetical protein [Arabidopsis thaliana] | 803 | 1e-083 |
| XP_002517614 Microsomal signal peptidase 18 kDa subunit, putative [Ricinus communis] | 798 | 5e-083 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9BY50 Signal peptidase complex catalytic subunit SEC11C | 522 | 2e-052 |
| Q5RC30 Signal peptidase complex catalytic subunit SEC11C | 522 | 2e-052 |
| Q9WTR7 Signal peptidase complex catalytic subunit SEC11C | 520 | 4e-052 |
| P13679 Signal peptidase complex catalytic subunit SEC11C | 519 | 6e-052 |
| Q9D8V7 Signal peptidase complex catalytic subunit SEC11C | 519 | 6e-052 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LW08 At3g15710 | 817 | 2e-085 |
| Q9SSR2 F6D8.18 protein | 804 | 8e-084 |
| Q570X6 Putative uncharacterized protein At1g52600 | 803 | 1e-083 |
| B9RV45 Microsomal signal peptidase 18 kDa subunit, putative | 798 | 4e-083 |
| B9GKW5 Predicted protein | 795 | 8e-083 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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