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Information for unigene UN25988
| FASTA Sequence |
| Unigene ID: UN25988 | Length: 932 |
SSR | | GACGCATGAAAAGATATTCTCATTATCACCAAATACAATTAACAGAAGAATAGTTTTTGGAAATAACATAAGATCACTCAAGTTGA
CCATACCACACACCTTGGATCTTCACATCCTTTGGCACCTTGGCACCCAAGTCAGTGTCCGAAGGCTGAAGACTCTCGAACACTCC
GATCACTTCTCCTGTCTCAGGTTTGCTCTTAGTCACTTTAAGAGTGATCTCTCCCACCGAAGCTGCCGTGTTTTTCACGTTCTCCT
TTGAAAGCTCCTCTTCATCTCCTCTGCTTTCTTTCCTTCTTCTTTTTTATCCTCCTCTGGTTTGTTCTCTGGTGGCTGAGATGGTG
GAGGAATAGGAGAAATAAGCACCACTTCACGGTGGGTCTTCTTTTGAACTCGGGCCAATACTTTCAATGGGTCAGCTTTTTCTCCC
TTCACCACCACTTTACCCGCTTTACAATCAGTCATCACATCTTCCACTCCTTCGAAACCTTTGAGGCAACGGCGGACTTTTCTTGC
ACAGCCTTCACAGTGCATGTACACCTTGAGAATAATCTCTTGCGGTGGTGGAGGTGGCGCTGGAGCTTCCGGCGCCGCCGGTGGAG
ACTCATCTTTGGAATCTTTAGTAGCTTCTCCTTCTTGAGTTTTCTTCTCGGAATCTTCTCCTTTTTCCTCACCAACCTCAACTTTC
TTTCCTTCTTCTTTTTTATCCTCCTCTGGTTTGTTCTCCTCCATTTTCTTCTCCTCTGGTACTTCTTGCTTCTTCTCTTCCTCTCC
CATTTTTGTTTTTGGTTAAGTTTTGAGTGTTTCTATGTTCACAAAAAATCGCAATGCCCAAAGAGAAGCTTATAAATCTCTCTCAC
GCTTTCTATCTCCCTCTCTCTCTCTAAAGAACCACTTGGGTGTTGGTACAAAGGTGGAACTGTGGACCTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568974 farnesylated protein 3 [Arabidopsis thaliana] | 679 | 4e-069 |
| AAN60281 unknown [Arabidopsis thaliana] | 676 | 9e-069 |
| NP_001078790 farnesylated protein 3 [Arabidopsis thaliana] | 620 | 3e-062 |
| XP_002862512 hypothetical protein ARALYDRAFT_497416 [Arabidopsis lyrata subsp. lyrata] | 584 | 4e-058 |
| XP_002511150 metal ion binding protein, putative [Ricinus communis] | 484 | 2e-046 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S841 Oxygen-evolving enhancer protein 1-2, chloroplastic | 346 | 7e-032 |
| P23321 Oxygen-evolving enhancer protein 1-1, chloroplastic | 343 | 2e-031 |
| Q40459 Oxygen-evolving enhancer protein 1, chloroplastic | 313 | 5e-028 |
| P23322 Oxygen-evolving enhancer protein 1, chloroplastic | 310 | 1e-027 |
| O49079 Oxygen-evolving enhancer protein 1, chloroplastic | 297 | 4e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C5D3 Putative uncharacterized protein At5g63530 | 679 | 3e-069 |
| Q8H7D8 Putative uncharacterized protein (Fragment) | 676 | 6e-069 |
| Q9FMU9 Similarity to ATFP3 | 620 | 2e-062 |
| B9RAC5 Metal ion binding protein, putative | 484 | 1e-046 |
| Q9ZRE7 ATFP3 (Fragment) | 449 | 1e-042 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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