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Information for unigene UN25990
| FASTA Sequence |
| Unigene ID: UN25990 | Length: 961 |
SSR | | GTCCAAAACATCAATTCATTGCCAAAGAAGATTTGTTTTTGGTACAGACAATACATTTCAATCACACTATTCATTCTGTGCCCAGT
TGCATTTCTGATAACTAAAACAAAGCCACCACCCTATCTGTTCCAAGCAATAAATAACCTATACACAGTCTACAGAGAGGGTCCAA
AACAGAGTATTGTACTGATACAAACATCCACCCAAAATATAAAACTAAACATGTGGTTGTTGTGCATGAACTTTCACTCAAGATCT
ACCATTAGCAGCCATGGCTGACTTCTCAGACCTGAGGCTGGAACTTGCTTCTGAAGTGTTCTCATCAGAGGTTGCTCCTCCTCCTC
CTCCTCCTTCTCTTTACGCGCACCATTCTTCTTCTTGGCATTGAGAAACCGGCCTCCACATCCTCTTGGCCGGTTTATCGCATGCA
AATGCCGAGATTCATGCATATACGGCTTCTTTGACTTCATGGCTCTGTTCCGAGCCTCAAGTTTTGCCCTGGATTGCCTACGCCTG
AGTATACCGTGGTACTGCTTTGCGTTAACAAAAACAGGCTCCTCGACTGCATCGCACTGTAATGGAACCACTTGTTGATGCATTCC
CATTAACTGCATTTGAACCCCAGGATATGGATGTGGAAGATACGCTTGGTGTGCAAAGACGCTTCTGTAGTAAGGATCTGGATACG
GGTAGAGCCCATGCGCCATCGGCTCTGAGTAGACGGAGCTTGTATCTATAGATTCAGAACACGGTCCTGAAGGAGCCCGGGGTGGG
GTTTGGGAATCTGGACGTTCTTGCTTCTTGTGACTTTCATTGTTATCAGAGAGCTCATGCACTGAAGAAGTCATGTCTCATGAAGA
CTGTCCTCTCTCCAAGTTAACAAGTCTCAAAGCTCCAATGAATAAACCAGAAAACAAGATTGCAGTAGTACAAGAGCCACCAAAGC
TAGAATTTTTAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34465 unnamed protein product [Thellungiella halophila] | 807 | 6e-084 |
| NP_850235 nuclear transcription factor Y subunit A-4 [Arabidopsis thaliana] | 797 | 9e-083 |
| XP_002862435 predicted protein [Arabidopsis lyrata subsp. lyrata] | 786 | 2e-081 |
| XP_002881354 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein [Arabidopsis lyrata subsp. lyrata] | 786 | 2e-081 |
| AAC16262 putative CCAAT-binding transcription factor subunit [Arabidopsis thaliana] | 592 | 5e-059 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8VY64 Nuclear transcription factor Y subunit A-4 | 797 | 4e-084 |
| Q84JP1 Nuclear transcription factor Y subunit A-7 | 582 | 3e-059 |
| Q93ZH2 Nuclear transcription factor Y subunit A-3 | 305 | 4e-027 |
| Q9LNP6 Nuclear transcription factor Y subunit A-8 | 294 | 8e-026 |
| Q945M9 Nuclear transcription factor Y subunit A-9 | 283 | 2e-024 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3ED48 Putative uncharacterized protein At1g30500.1 | 546 | 8e-054 |
| B9NB87 Predicted protein | 427 | 5e-040 |
| B9GG16 Predicted protein | 415 | 1e-038 |
| C6SW72 Putative uncharacterized protein | 402 | 4e-037 |
| C6TCG7 Putative uncharacterized protein | 402 | 4e-037 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G34720.1 NF-YA4 (NUCLEAR FACTOR Y, SUBUNIT A4); specific transcriptional repressor/ transcription factor | 797 | 3e-085 |
| AT1G30500.2 NF-YA7 (NUCLEAR FACTOR Y, SUBUNIT A7); specific transcriptional repressor/ transcription factor | 582 | 3e-060 |
| AT1G30500.1 NF-YA7 (NUCLEAR FACTOR Y, SUBUNIT A7); specific transcriptional repressor/ transcription factor | 556 | 3e-057 |
| AT1G72830.1 NF-YA3 (NUCLEAR FACTOR Y, SUBUNIT A3); transcription factor | 305 | 4e-028 |
| AT1G17590.1 NF-YA8 (NUCLEAR FACTOR Y, SUBUNIT A8); transcription factor | 294 | 7e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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