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Information for unigene UN25992

FASTA Sequence
Unigene ID: UN25992Length: 933 SSR 
GGAACAGAGAGAGAGAGATTTTAGCTAAACTAAATCAATGGCGGCGATGATAGTAAAGGCTGGACTTTTCGCCGCCCTTCCCCTCC
GTGGTCAACTCCCTCGTTGCTTCTCCTCTTCGTTGAAAACAACGACTACGGTAGTGGCAGTTTCTCGATCTCTTGTAATCTCTGCC
GTTAATAACCATCACCGTCGAAGCTCCTGGCCTCGAGTTACTACTTTCTGCACGGCGGCGACGACGGTTTCAGCGGATGAACCGGA
GAAGAAGATCGAGTCTGTGGAGGAGGTGGAGGAGAATGTGAAGGAGACGGCGAATCTTTTAGACATAAGAGTAGGGAGAATTGTGA
AAGCTTGGCAACACGAGGAGGCTGATTCTCTGTATGTTGAAGAAGTCGATATAGGTGGAGCTGAGCCAAGAATCATCTGCAGTGGT
CTCGTCAAATACGTACCTCTCGATCTCCTACAGGGTGCATCAGTTGTGGTGTTGGCTAATCTGAAGCCAAGGAACATGAGAGGAGT
CAAGTCATGCGGTATGCTTCTCTGTGCTTCCGACTCATCCCATGAGAATGTTGAGCCTCTGGTTCCACCACAAGGGTCTGTTCCTG
GGGATAGAGTTTGGTTTGGTAATGAAGAAGATCTTGAGCAGCTTCCTGAGCCTGCACCTCCTAACAAGGTTCAGAAGAAGAAGATG
TGGGAAGCGGTTCAACCGCTGTTGAAGACTGATGATTCTGGTGTTTCGATGCTTAAGGAGCATTTGATGCGGTCATCTTCTGGTCT
TGTTACTTCCAACACTTTGAAAAAGGCCAACATTTCTTGATTTACTGTATTTGTTTTCAGAGAGAGATGAGAGATATGAAGAACAA
GCCACTAGAGCGAATTTTTTTATTGCAATGAAACTAATGTTTTTTTTTGTTGATTCATCAATAAGGTTTGTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191557 Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]10111e-107
XP_002878307 tRNA-binding region domain-containing protein [Arabidopsis lyrata subsp. lyrata]10092e-107
XP_002529219 methionyl-tRNA synthetase, putative [Ricinus communis]6723e-068
XP_002280840 PREDICTED: hypothetical protein [Vitis vinifera]6509e-066
XP_002331598 predicted protein [Populus trichocarpa]6382e-064

Swiss-Prot top hits (Blast detail)Scoree value
Q7ZX51 Tyrosyl-tRNA synthetase, cytoplasmic3493e-032
Q6DIJ1 Tyrosyl-tRNA synthetase, cytoplasmic3422e-031
Q29465 Tyrosyl-tRNA synthetase, cytoplasmic3395e-031
Q4KM49 Tyrosyl-tRNA synthetase, cytoplasmic3332e-030
Q5R8T5 Tyrosyl-tRNA synthetase, cytoplasmic3305e-030

TrEMBL top hits (Blast detail)Scoree value
Q9M1X8 Putative uncharacterized protein10119e-108
B9STA0 Methionyl-tRNA synthetase, putative6722e-068
B9N8K9 Predicted protein6382e-064
C6SX59 Putative uncharacterized protein6174e-062
A2XRP7 Putative uncharacterized protein5942e-059

Arabidopsis top hits (Blast detail)Scoree value
AT3G59980.1 tRNA-binding region domain-containing protein10124e-110
AT2G40660.1 tRNA-binding region domain-containing protein3118e-029
AT4G13780.1 methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative2973e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  50%
 
72  50%

Unigene MembersMember information