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Information for unigene UN25992
| FASTA Sequence |
| Unigene ID: UN25992 | Length: 933 |
SSR | | GGAACAGAGAGAGAGAGATTTTAGCTAAACTAAATCAATGGCGGCGATGATAGTAAAGGCTGGACTTTTCGCCGCCCTTCCCCTCC
GTGGTCAACTCCCTCGTTGCTTCTCCTCTTCGTTGAAAACAACGACTACGGTAGTGGCAGTTTCTCGATCTCTTGTAATCTCTGCC
GTTAATAACCATCACCGTCGAAGCTCCTGGCCTCGAGTTACTACTTTCTGCACGGCGGCGACGACGGTTTCAGCGGATGAACCGGA
GAAGAAGATCGAGTCTGTGGAGGAGGTGGAGGAGAATGTGAAGGAGACGGCGAATCTTTTAGACATAAGAGTAGGGAGAATTGTGA
AAGCTTGGCAACACGAGGAGGCTGATTCTCTGTATGTTGAAGAAGTCGATATAGGTGGAGCTGAGCCAAGAATCATCTGCAGTGGT
CTCGTCAAATACGTACCTCTCGATCTCCTACAGGGTGCATCAGTTGTGGTGTTGGCTAATCTGAAGCCAAGGAACATGAGAGGAGT
CAAGTCATGCGGTATGCTTCTCTGTGCTTCCGACTCATCCCATGAGAATGTTGAGCCTCTGGTTCCACCACAAGGGTCTGTTCCTG
GGGATAGAGTTTGGTTTGGTAATGAAGAAGATCTTGAGCAGCTTCCTGAGCCTGCACCTCCTAACAAGGTTCAGAAGAAGAAGATG
TGGGAAGCGGTTCAACCGCTGTTGAAGACTGATGATTCTGGTGTTTCGATGCTTAAGGAGCATTTGATGCGGTCATCTTCTGGTCT
TGTTACTTCCAACACTTTGAAAAAGGCCAACATTTCTTGATTTACTGTATTTGTTTTCAGAGAGAGATGAGAGATATGAAGAACAA
GCCACTAGAGCGAATTTTTTTATTGCAATGAAACTAATGTTTTTTTTTGTTGATTCATCAATAAGGTTTGTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_191557 Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana] | 1011 | 1e-107 |
| XP_002878307 tRNA-binding region domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 1009 | 2e-107 |
| XP_002529219 methionyl-tRNA synthetase, putative [Ricinus communis] | 672 | 3e-068 |
| XP_002280840 PREDICTED: hypothetical protein [Vitis vinifera] | 650 | 9e-066 |
| XP_002331598 predicted protein [Populus trichocarpa] | 638 | 2e-064 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q7ZX51 Tyrosyl-tRNA synthetase, cytoplasmic | 349 | 3e-032 |
| Q6DIJ1 Tyrosyl-tRNA synthetase, cytoplasmic | 342 | 2e-031 |
| Q29465 Tyrosyl-tRNA synthetase, cytoplasmic | 339 | 5e-031 |
| Q4KM49 Tyrosyl-tRNA synthetase, cytoplasmic | 333 | 2e-030 |
| Q5R8T5 Tyrosyl-tRNA synthetase, cytoplasmic | 330 | 5e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M1X8 Putative uncharacterized protein | 1011 | 9e-108 |
| B9STA0 Methionyl-tRNA synthetase, putative | 672 | 2e-068 |
| B9N8K9 Predicted protein | 638 | 2e-064 |
| C6SX59 Putative uncharacterized protein | 617 | 4e-062 |
| A2XRP7 Putative uncharacterized protein | 594 | 2e-059 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G59980.1 tRNA-binding region domain-containing protein | 1012 | 4e-110 |
| AT2G40660.1 tRNA-binding region domain-containing protein | 311 | 8e-029 |
| AT4G13780.1 methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative | 297 | 3e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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