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Information for unigene UN25997

FASTA Sequence
Unigene ID: UN25997Length: 649 SSR 
GGGCACAACTTTGGTATCTCCTCCTCCTCCTCCTCTCATAACTCTTTAGGAGAAATCTTTCTATCTTCTTTTGTGTGTTTGTTTCT
ATAGTTTGATTTGGGTTTTCAGGGAACTCTGTAGCAGAAGCAGAAGTAGAAACAGAGATGGAGCACGGTTCGTTCACGAATGATAG
TCATGCTTCGTTTACTCTTGCAGAAGAAGATCACACTCTTGCTAACGCCGTTCGTTTCATGTTAAATCAAGATCCGAGAGTAACAT
TGGCTGGGTACAGCATCCCACATCCTTCCCTTGAATGTGTCAATGTCCGTGTCCAGACCACTGGCGATCCGGCGAGGGAGGTACTG
AAAGATGCATGTCAAGAGCTCATGCTCATGAACAGACATGTGAGGAGTGTCTTTGACAAGGCGGTTTCAGAGTTTAAGGTTAAACA
AGCGCGTTTGGCTACTGAGGAAGAGAAGAATAAGAAGGCCGAAGAAGAAGAGCTTAAGAAGTAGAGGGATCTACTCGCTTCCATGG
ATATTGAAAGCGATTGATTTTGTGGGGGGAAACAAAACATTTGTATTCTCTCTATAGCGTTTTTTTTTATTATCTTGATTTGTATT
CTCTACATTTGTCAGACGACTCCTACCTAATTGACTAAATATTATTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180514 DNA-directed RNA polymerase III subunit C19 [Arabidopsis thaliana]4661e-044
XP_002879217 predicted protein [Arabidopsis lyrata subsp. lyrata]4651e-044
ABW81101 RNApol24 [Cleome spinosa]4051e-037
ACU15848 unknown [Glycine max]3862e-035
XP_002281364 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]3557e-032

Swiss-Prot top hits (Blast detail)Scoree value
Q9Y2S0 DNA-directed RNA polymerases I and III subunit RPAC21861e-013
Q5XK67 DNA-directed RNA polymerases I and III subunit RPAC21852e-013
Q1RMG8 DNA-directed RNA polymerases I and III subunit RPAC21842e-013
P97304 DNA-directed RNA polymerases I and III subunit RPAC21842e-013
Q6DRI4 DNA-directed RNA polymerases I and III subunit RPAC21682e-011

TrEMBL top hits (Blast detail)Scoree value
Q42483 DNA-directed RNA polymerase 14 kDa subunit (AtRPAC14)4667e-045
B2BXR4 RNApol244058e-038
C6T2I2 Putative uncharacterized protein3861e-035
B9GIX0 Predicted protein3394e-030
C5YTE8 Putative uncharacterized protein Sb08g0056403341e-029

Arabidopsis top hits (Blast detail)Scoree value
AT2G29540.1 ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT); DNA binding / DNA-directed RNA polymerase/ protein dimerization4933e-050
AT2G29540.2 ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT); DNA binding / DNA-directed RNA polymerase/ protein dimerization4933e-050
AT2G29540.3 ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT); DNA binding / DNA-directed RNA polymerase/ protein dimerization3312e-031
AT3G52090.1 NRPB11; DNA binding / DNA-directed RNA polymerase1341e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information