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Information for unigene UN26016

FASTA Sequence
Unigene ID: UN26016Length: 1164 SSR 
GTCAACTAGATGGCTCTCTCAAGCAAGTTCTCTCCATCAAGACACAGTACATGCTTGATCAGCTCTCTGATCTTCAAAGCAAAGAG
CAAATGTTGCTTGAAACCAATAGAGCATTGGCGATGAAGCTGGATGATATGATTGGTGTGAGAAGCCATCATATGGGAGGAGGAGG
AGGATGGGAAGGCAATGAACAGAATGTTTCGTACGAGCATCATCAAGCTCAGTCTCAAGGACTATTCCAGCCTCTTGAATGCAATC
CTACTCTGCAGATGGGGTACAACAATCCAGTAGGCTCGGAGCAGATAACTGCAACAACACAAGCTCAGGCGCAGCCAGGGAACGGT
TACATCCCAGGCTGGATGCTCTGAGTGTCACATTCTGAGAGTCAAATGTGATCAAACTCACCAACAAAAGATCCGTTTTAAGTAAT
ATAAATAGTAGTATAGAACACAAGACTTGGATTTATTTATATAATTAAGTGGCTATGTATATTGTCCTAAGGAATCTGCAAGACTT
GAGTGTCTTCTGGGAAACCTTGCTACATTTAGGGATTGAAATGTGTGTGTGGAACTTGTTCTGATTACTTAAATTGTCAAAGTACT
GCACCAATCTAAATTACAAACATTGTGAATTACAATCTTGGGATCTCTCCTTGAATGTAAACCAAATTATAAACCATCACATATTA
ATAAAAGGTTTTCATACAAGATGATGTAATAAGTTTAATGCTTCCTTGGACAGAACAGTGCACCAGAGGCATATCGTGAGGAACAT
CAGATTCCTGTGTCTTTTGTTGTTGTTGTTGTTGTTGTGAGCGTTTCCTCAGAACTCAATAATCTAACTCTGCATAGCTTACATGT
CTTTCATTTTTCCGTCAATATATATATTATACACAAAATGTTGTTGATGAACACTAATTTACAGATCAAAGCAATTAGCCACATCC
CTATGTTGCCATGTTGATCTCCACCTTTTACAGTTTAGGCAGAATCAAATGTTAATTCAGTCAAGGGGATTCGTTGAACTCCATCA
CCTTCCCACAAACAGGGCAGTCCTCGCTTCTCTCCATCCATTCATAAATGCAACCAAGGTGGAAATGGTGAGAACACTTTGTAACA
ATCTTGGGGTTCTCTGCTGTGTACTCTTCAAGACATGTTGGACAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568322 developmental protein SEPALLATA 1 [Arabidopsis thaliana]5935e-059
AAA32732 transcription factor [Arabidopsis thaliana]5693e-056
ABD60320 SEP1 [Boechera stricta]5693e-056
XP_002873742 hypothetical protein ARALYDRAFT_909555 [Arabidopsis lyrata subsp. lyrata]5684e-056
CAD48303 MADS-box protein SEP1-a [Brassica oleracea var. botrytis]5641e-055

Swiss-Prot top hits (Blast detail)Scoree value
P29382 Developmental protein SEPALLATA 15932e-060
P29384 Developmental protein SEPALLATA 24525e-044
Q8LE94 E3 ubiquitin-protein ligase At3g022902851e-024
Q38694 Agamous-like MADS-box protein AGL9 homolog2098e-016
P29383 Agamous-like MADS-box protein AGL32081e-015

TrEMBL top hits (Blast detail)Scoree value
Q5XXN8 SEPALLATA15934e-059
Q1KV06 SEP1 (Fragment)5692e-056
Q5XXN7 SEPALLATA15692e-056
Q5XXL8 SEPALLATA15683e-056
Q8GTF1 MADS-box protein SEP1-a5648e-056

Arabidopsis top hits (Blast detail)Scoree value
AT5G15800.1 SEP1 (SEPALLATA1); DNA binding / transcription factor5942e-061
AT3G02310.1 SEP2 (SEPALLATA 2); DNA binding / protein binding / transcription factor4533e-045
AT5G15800.2 SEP1 (SEPALLATA1); DNA binding / transcription factor4508e-045
AT3G02290.1 zinc finger (C3HC4-type RING finger) family protein2868e-026
AT5G15790.1 zinc finger (C3HC4-type RING finger) family protein2752e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  50%
 
112  50%

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