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Information for unigene UN26018
FASTA Sequence |
Unigene ID: UN26018 | Length: 1194 |
SSR | | GATTGTAAATTTCAACATTAAGACTTTCTTTCACCATATAACAACAATGAATTGTGCTCTTGATGTATAGTTAAGATCCAAGATCT
AAATTGAAAACAACAAGTTGAGATAATTATGTAAATTCGAAGACCAAAGATTTGAAACAAAACCTTGAGTTCAATGTTTTGAAGTT
ATAAGGCATTGTTACAAGGCTACTAGTAAATTATAATAACTAACCATAGATTCTAAGCAAAAACACAATGATACTAACCAATAATC
ATATCTACAAATCAAGAAGAACCCTGACGGAAAAGACCCATCTCTTTATACCACCATCTTCTGACGCTGTTGCTCTGTTTCATAAC
AGAAGCTGCCAGCTGATGATGACGACAACAACACATCTTGATGCACTGTTAAGGCGTCCAGATTCATTTTAAGTTCCCCTACAGAC
GCTAAAGCCATGAGTTCCTTACTGTCTAAACCTTTCGCTGGCCCGAGGCTGCACCTCTCGCTACCGTGCTTGTCCAAAGCTTTCTT
GAACTTATTAATGGTGGCGATGGTGCAGCTGAAACTACACAGTTTACCCTCTGCTCCTCTATAGAACTTGAAGAAAGGAAGCACAT
GGACGTTAAGGCCATGACACATTGTTCTAAGCTCTTCTTGATTCACTTTGAGAAACATCACGTTTGGGTTTGTTTCAGCCAATTGA
CAGATCTTTGGGTGGAGAGATTTGCAGCCACCACAACCAGGAGAGTAGAAATCAAGAACAACTAATCTATCACCAGCGTTAAGCAA
AGAGTCAACGAGATGATTAGCAGAGTGAATCTCTAACATGTTGACTTTCGTTGACTTCTCCCACCACCTCATCCCTCTACTCATAC
CAATTGATGATGTCTTTGTAGGAACAACATAGGAAGAAGAAGACAAGGCGGTGAGTGTTTGGTTTGAAGCCACGGGATGTTCCTTC
AAATCTAGGCTCATAACTGGCGAAAGTTTCAATTTTGATTTGTTCTCCTGAGAAAGTGAACAAAACCCAGAAAGCCCGTGATCGAT
TCTAGTCCCGGAGTATTGAGCACCGGTTCCACACAGAGCTCTGAGAGGTGAAACAGCATCCATGTCTGTCTACAGGAGGAAGACTC
AGAGATTCTTGAGATGAAGAAGAAGAAGAAGGAGAGAGAAAAGTGCAGAGGGGTTTTGATTGAATGAGATTAAAAA
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GenBank top hits (Blast detail) | Score | e value |
NP_200952 thioredoxin-like 1-2 [Arabidopsis thaliana] | 932 | 3e-098 |
XP_002864732 thioredoxin family protein [Arabidopsis lyrata subsp. lyrata] | 909 | 1e-095 |
XP_002514739 Thioredoxin II, putative [Ricinus communis] | 659 | 1e-066 |
XP_002284847 PREDICTED: hypothetical protein [Vitis vinifera] | 650 | 1e-065 |
CBI15208 unnamed protein product [Vitis vinifera] | 650 | 1e-065 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9XFI1 Thioredoxin-like 1-2, chloroplastic | 940 | 1e-100 |
O64654 Thioredoxin-like 1-1, chloroplastic | 556 | 5e-056 |
Q10M18 Thioredoxin-like 1-2, chloroplastic | 545 | 9e-055 |
Q6Z4N3 Thioredoxin-like 1-1, chloroplastic | 542 | 2e-054 |
O22779 Thioredoxin-like 1-3, chloroplastic | 531 | 4e-053 |
TrEMBL top hits (Blast detail) | Score | e value |
B9RLX0 Thioredoxin II, putative | 659 | 8e-067 |
A5C3U7 Putative uncharacterized protein | 650 | 9e-066 |
A5BR33 Putative uncharacterized protein | 643 | 6e-065 |
C6T8M7 Putative uncharacterized protein | 611 | 3e-061 |
Q5ZF47 Thioredoxin 2 | 607 | 9e-061 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G61440.1 ACHT5 (ATYPICAL CYS HIS RICH THIOREDOXIN 5) | 943 | 5e-102 |
AT1G08570.1 ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 556 | 4e-057 |
AT1G08570.2 ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 556 | 4e-057 |
AT2G33270.1 ACHT3 (ATYPICAL CYS HIS RICH THIOREDOXIN 3) | 531 | 3e-054 |
AT1G08570.3 ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 509 | 1e-051 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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