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Information for unigene UN26043

FASTA Sequence
Unigene ID: UN26043Length: 1211 SSR 
GGGTCGGAAAATTGCATGTCCTAACTGCGACAAAGAGATGACTATGACGACGACAACAGAGGAGAAACCATCTTCCGATGGCCGAG
GAGGTTGGGGTTTCTTCAAGATCCCGTTTCGAAACTCTAGCGGCCGCGGAAACGCAGCATCAAGTGCCGCCGCCACGTCTTCTTCT
GCTTCTTCTACTACATCTTCTCATCTCCATAACCACCATCATCACCACCACCACCACCACCATCATCATCAGCTTGGCTATAACGG
GCCCCATGGTGATGGATCGGGTCAAAATCAACACCCGACTCCTTCTCCTTCGGTATCATCGGTAGCTAAGTCGTTTCTGCCTACGA
AACGTAGATTGAAGCTTGATCCGTCGGAGAAACTCTATTTTCCTTATGAGCCTGGAAAGCAAGTGAGGAGCGCTATTAAGATTAAA
AATACCAGCAAATCACATGTAGCCTTTAAGTTTCAAACAACTGCACCGAAGAGTTGCTTTATGCGTCCACCGGGTGCTATTCTTGC
TCCTGGAGAGACTATTATCGCCACCGTGTTCAAATTTGTTGAGCCTCCTGAGAATAATGAGAAGCCAATGGATCAAAGGAGCAGAG
TTAAGTTTAAAATCATGAGCTTGAAGGTGAAAGGTCCGATGGACTATGTTCCTGAGCTGTTTGATGAGCAAAAGGATGATGTGTCT
AAGGAGCAAATATTGCGAGTTATCTTTCTGGACCCAGAACGCCCCAACCCTGCACTGGAGAAACTGAAGCGCCAGTTAGCAGAAGC
GGATGCAGCAGTGGAGGCAAGAAAGAAACCACCAGAGGAAACAGGTCCAAAGATGATTGGAGAAGGACTTGTCATCGATGAATGGA
AGGAGCGCCGAGAGAGATATCTTGCACAGCAACAAGGCGAAGGAGTTGACTCTGTTTAAGAACTAAGAAGATCCTTCTCAGGACAC
AAAAAAGAAAACAAGTGCGTGCTTGTGAAGAAAGAAGAAGAAGAGGCCAAGATATTAAATTTTCTCTACTAACTTCCTCATTCATA
ATGCAATCTTAAGGATCATGTTGGTAAAGAAAAAACAAAGAACGAAACTTTTTTCATGTAAAAAAAAAAAGAAAACTTGGGATGGG
GGTGGGGGTTTGTTAATGAATTGTTCATGGTAAGACTTAAAACTTAATAAAATGTGACAATGGATGCTGAATCAACTCGGCTGATC
TAATCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869886 vesicle-associated membrane family protein [Arabidopsis lyrata subsp. lyrata]14467e-158
NP_567627 vesicle-associated membrane family protein [Arabidopsis thaliana]14342e-156
NP_974584 vesicle-associated membrane family protein [Arabidopsis thaliana]10121e-107
NP_567287 vesicle-associated membrane family protein [Arabidopsis thaliana]10112e-107
XP_002317246 predicted protein [Populus trichocarpa]10093e-107

Swiss-Prot top hits (Blast detail)Scoree value
Q0KHT7 Probable serine/threonine-protein kinase CG326661353e-007
Q24523 Protein bunched, class 2/F isoform1335e-007
A7M7C7 Ladybird homeobox corepressor 1-like protein1335e-007
Q54GQ1 Myotubularin-related protein DDB_G02900051335e-007
P35405 Alpha-2C adrenergic receptor1327e-007

TrEMBL top hits (Blast detail)Scoree value
Q8VYN2 Putative membrane associated protein14341e-156
O65410 Putative membrane associated protein13462e-146
Q3E7Q2 Putative uncharacterized protein At4g21450.210121e-107
Q8LPQ7 AT4g05060/T32N4_1210111e-107
B9HYN1 Predicted protein10092e-107

Arabidopsis top hits (Blast detail)Scoree value
AT4G21450.1 vesicle-associated membrane family protein / VAMP family protein14355e-159
AT4G21450.2 vesicle-associated membrane family protein / VAMP family protein10126e-110
AT4G05060.1 vesicle-associated membrane family protein / VAMP family protein10126e-110
AT5G54110.1 ATMAMI (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED MANNITOL-INDUCED); structural molecule8324e-089
AT3G10810.1 zinc finger (C3HC4-type RING finger) family protein1532e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
115  100%

Unigene MembersMember information