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Information for unigene UN26051

FASTA Sequence
Unigene ID: UN26051Length: 1331 SSR 
GGGGGAATGACATTCCAGCAAAAATCCAAACAAAAGTATTCAAAAAATTAAATTAAAAAAAATCCACTCCTCACAATTGTCTTCCC
CTTCTTCTTCTTCTCTTCCTGTCGCGAAGATCGAAAAATCATCATCTCAAACCTTCTCCGATTATTCTCTGGATTGATGAATTAAG
GGTTATAAAAGCTGAGTACCCCATACAAAGCGTTTCAAGTGGTTAGTGAATTAAAAGAAAAAAAAGGGATGGCTTGTAGAGGTTGT
TTGGAGTGTTTGCTAAAGTTACTCAACTTCGTTCTGGCTATTGCTGGACTAGGCATGATTGGTTATGGTATCTACTTATTTGTTGA
GTACCAGAGAGCAACTGATGATCACTCTGTTTCATTCATTCCTACAAATGTCAACGACCAAAGTTACGTCTCCTCTGGGAGGCCCA
TGCTTATGGCTCTCGCACTCTCTTCCAATTTCTTTGACAATCTCCCCAAAGCTTGGTTCATCTACTTGTTCATCGGTATCGGCGTG
GCTCTCTTTGTTATTTCATGTTGTGGCTGTGTTGGTACTTGTTCAAGGAGCATCTGCTGCTTATCTTGTTACTCTCTGCTTCTCAT
CTTGTTGATCTTGGCTGAGCTTGGAGCTGCAGCTTTTATTTTCTTCGACAACAGCTGGAGAGATCAAATTCCTTCTGACAAGACTG
GAAATTTCGATACCATCTATCATTTCCTGAGAGAAAACTGGAACATTGTCAGGTGGGTTGCTCTAGGAGCCGTTGTTTTCGAGGCT
TTGCTTTTCTTGCTCGCCCTCATGGTCAGGGCAGCTAACACCCCAGATGAGTATGACAGTGATGATGAGTTTATTGCTCCTCCTAG
GCAAATCAGGCAGCCATTCATCAACCGCCAACCCGCCCCTGTTACGGGTGTCCCAGTTGCTCCTACTTTGGACCAACGCCCGAGCC
GCAGTGACCCTTGGAGCGCACGTATGAGGGAGAAGTATGGGCTAGACACATCTGAGTTCACATACAATCCCTCAGAGTCACACCGG
TTCCAGCAAATGCCGACGCAACCAAATGAAGAAAAGGGACGATGTACCATCATGTGAGTCCCATGTTATAACGGTCTCAAATTAAA
AGTTCAGTCAATTCTCTTTTCTTGTTATCTTTTCTGTGTGTGTGTGTGTAACAATCAAGAGTGTCAGTGATATTATTAGAGGTATG
CTTCTATGGAAACTCTTTTTGTTGCGTCTGTGTAGTCTTTTTTGTAAGTACTTTACCATCATGAATATTCATCTTGGTTGTCTGAT
TTGGTCCTCTCATTTTTATTATAGATAAAATACATCTGTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34310 unnamed protein product [Thellungiella halophila]13348e-145
NP_564399 tobamovirus multiplication 2A protein [Arabidopsis thaliana]13203e-143
XP_002893721 hypothetical protein ARALYDRAFT_473428 [Arabidopsis lyrata subsp. lyrata]13088e-142
XP_002527636 conserved hypothetical protein [Ricinus communis]10694e-114
ACU24289 unknown [Glycine max]10605e-113

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9C5W7 At1g32400/F5D14_2213202e-143
B9SNR7 Putative uncharacterized protein10693e-114
C6TMZ7 Putative uncharacterized protein10603e-113
A9P8P8 Putative uncharacterized protein10542e-112
B9MTY5 Predicted protein10282e-109

Arabidopsis top hits (Blast detail)Scoree value
AT1G32400.1 TOM2A (TOBAMOVIRUS MULTIPLICATION 2A); protein binding13308e-147
AT1G32400.2 TOM2A (TOBAMOVIRUS MULTIPLICATION 2A); protein binding13308e-147
AT1G32400.3 TOM2A (TOBAMOVIRUS MULTIPLICATION 2A); protein binding13308e-147
AT2G20230.1 LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28770.1); Has 91 Blast hits to 91 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).3145e-029
AT4G28770.1 FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20230.1); Has 94 Blast hits to 94 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).2877e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
104  67%
 
92  33%

Unigene MembersMember information