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Information for unigene UN26107
| FASTA Sequence |
| Unigene ID: UN26107 | Length: 1117 |
| SNP | GGTGGATCAAATTGAGTACCGATTCAAAAAGTTTCAAACAACACTCAAATTCGTAAAAATGGCCGGTCTCCGAGTGCAAACGCTCA
TATTCGTTCTGGTGACCTTAGCTATTCTAGATCGCACCGTTGTGGAGGCAAACTTCGACAAGAATTTTATTGTTACATGGGGTAAT
CAGCATATTGGTGTGACTGGTGACAACCTTCGACTTGTCCTTGACAAATCTGCAGGATCTGCTATTCGCTCAAAGGTGGCTCACTT
GTTCGGAACTGTAGAAATGCTTATCAAACTTGTGCCAGGGAACTCTGCTGGAACCGTTGCAGCTTGTTACATGTCGTCCACGGGAA
CTGCACACGACGAGATAGACTTTGAGTTCCTAGGGAATTCCACTGGCGAGCCGTACACGATCCACACCAATATATTTGCTAACGGG
AAAGGAGATCGCGAGCAACAATTCAAACCATGGTTTAACCCGACCAATGGTTTCCACAACTATACCATTCATTGGAACCCATCTGA
AGTTGTGTGGTTCGTGGATGGAACTCCAATAAGAGTTTATAGGAACTACGAGAAGGAAGGAATCGCATACCCAAACAAGCAAGGTA
TGAAAGTGTTTGCGAGTCTATGGAGCGCAGACGACTGGGCGACACAAGGAGGTCGAGTGAAGACAAACTGGACACAAGCACCGTTT
GTGGCCGAGGGTCGTAGGTACAAGGCAAGAACCTGCGTGTGGCAGGGACCGGTTAGCATCAAGCAATGCTCAGATCCAACCATAAA
GTTTAATTGGTGGACTTCACCGTCGTTTAGCCAGCTAACTCGAACGCAAATAGGCAGGATGCAAAAGATACGATCTGGTTTCATGA
TCTATGATTACTGCAAGGACACTAACAGGTTTAAAGGTGTCATGCCTCCGGAATGCTCCAAGAGACAATTTTAATCAAAGTTTTTT
TTTAATATATATTATACTTTCCCTTTTTTTGAATTTCAATCGTAATATGTTTTTGTTTGTCTTTTTCAAAAAAAAAAATATGTTTT
TCTTTGTGTGGAATTCCTTTTGTGTGTTCATTCATTTATAATTTTTCATTCGTATGATAAACAATGATAAGTTTGTTCTTTCTGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002869824 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1355 | 2e-147 |
| XP_002869468 hypothetical protein ARALYDRAFT_491872 [Arabidopsis lyrata subsp. lyrata] | 1343 | 5e-146 |
| NP_194614 xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] | 1335 | 5e-145 |
| XP_002324432 predicted protein [Populus trichocarpa] | 996 | 9e-106 |
| XP_002280688 PREDICTED: hypothetical protein [Vitis vinifera] | 968 | 2e-102 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SVV2 Probable xyloglucan endotransglucosylase/hydrolase protein 26 | 1335 | 2e-146 |
| Q38857 Xyloglucan endotransglucosylase/hydrolase protein 22 | 710 | 6e-074 |
| Q9ZSU4 Xyloglucan endotransglucosylase/hydrolase protein 14 | 704 | 3e-073 |
| Q9ZV40 Probable xyloglucan endotransglucosylase/hydrolase protein 21 | 688 | 2e-071 |
| Q38910 Probable xyloglucan endotransglucosylase/hydrolase protein 23 | 687 | 3e-071 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9ILQ8 Predicted protein | 996 | 6e-106 |
| B9RKL5 Xyloglucan endotransglucosylase/hydrolase protein 14, putative | 944 | 7e-100 |
| Q4LET4 Xyloglucan endotransglucosylase/hydrolase | 739 | 4e-076 |
| Q6EJD2 Xyloglucan endotransglucosylase | 738 | 5e-076 |
| Q56TP0 Endotransglucosylase/hydrolase XTH5 | 730 | 5e-075 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G28850.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 1336 | 1e-147 |
| AT5G57560.1 TCH4 (Touch 4); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 710 | 5e-075 |
| AT4G25820.1 XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 704 | 3e-074 |
| AT2G18800.1 XTH21 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 21); hydrolase, acting on glycosyl bonds / xyloglucan endotransglucosylase | 688 | 2e-072 |
| AT4G25810.1 XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 687 | 2e-072 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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