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Information for unigene UN26112
| FASTA Sequence |
| Unigene ID: UN26112 | Length: 2693 |
SSR | | GAAGGAGATCGACTTGTTGTCAAGGGAAACAAACCCCCCTAGATATGGCGGAGAAGCTTGCGCCAGAGAAGCGACATGATTTCGTT
CATAACGGGCAAAAGGTGTTTGAATGGGATCAAACCCTCGAAGAAGTGAACCTGTACATAACTCTGCCGCCTAATGTTCACTCAAA
GGCATTCCACTGCAAAATCCAGTCGAAACATCTCGAAGTTGGCATCAAAGGCAACCCTCCTTATCTCAATCACGATCTTAGTGCTC
CTGTGAAGACGGATTGCTCGTTCTGGACTCTAGAGGATGATATAATGCACATAACCCTGCAGAAGAGGGAGAAAGGGCAGACATGG
GCATCTCCAATTCTCGGACAGGGTCAGTTAGATCCGTACGCCACTGATCTAGAGCAGAAGCGTCTCATGCTTCAGAGGTTTCAAGA
AGAGGTTAGCTTTGCGAACAATCTTCTTGTTTTTTATTTTTGCACATTTTTGTTTTCTTGTTGAAGGATATCTAAAGCAATCTTGG
CACCACCTATGAATGGTATGTCCAAATAATAATTACACTGCCAAAGATTATCTGATTTGGATGGGTTGTGTCATGTCTAATCACAT
TGATTGTTTCCTTTGTTAAAGCTCCTTTTATAATTTTGGTTTCTCGTATCTCTGGTAAAACAGTCTGCATAGAACTGGTGATAGGG
GTAACTCGTGTGGTGGGTGTTTTGCTATGTTGATGAGATTGCTTACTCTTTGTCTAACTGGATTCTTAGCGGCCGTGCCCTATTGT
TTTTGTTCTACTTGTATCCATGGCTTCTATATAGCATTTGATGCTTTCCCTTTTATTTTTTATTTTTTTTCTGTCTCTGTGTTTGC
AGAATCCAGGATTCGACTTTTCACAAGCTCAGTTCACGGGTAACTGTCCAGATCCGAGTAGCTTCATGGGTGGTATTCGTTCTGAC
TAGTCAGTCCTTCCTACTCTTTTTGTTTCCATGAAAATGTCCCCATGGCTTGACTGACTGACTCTCTTCTGTTTAATCAAAATCAA
ATCATCTCTAAACTATTTTTCATTCACTTACGAATAAATGCTTTTGTCTTGTATTGTCGTCTCTGCTTAGTTATTCTTTTATTCCC
GACAAACAAAAACAGAACATCAAATTAAGTTCCTACATAGTCCGTTCATTCATCTTCCCCTCCCTTCGAATCCTGTTCTAGTATGT
GACACCTTTCGTTTCCATACAAAACTTTTTTTTAACGTATGTAATTTTAATGTTATTCTTTATTAAGAGATTAAACAAAAAAAAAA
CAAATTAAATAAGCGAAAAGGGAGTAGGGATGGCGCGCGTCATATTCCTTTGTGACACATAAACTTAAGACAGAGAGAGAGGAACG
AGTCTCGAGACGCTACGTCTTAAGCCAAACAGCCTTTTGTTTTTGTTCCTTCCTCTCTCTCTCTCTCGTAAACTCCTTCGTCTTCG
TCGTCTTTAGTGATTCTTCTTTCCACTTTTAACTACCTTCTTTAGCTCATCTTCTTCCTCTACATGGTCCTCTCCCCCACCCGCAC
ATCATGACTCTGACTCCTTCTCCGCCGCAGCAGCAAACACCCAACCCACCGCCCCGAGTCCTCATCGTCGGAAACTACTGCCACGA
CGTTCTCATCCAAAACGGCACCGTCGTGGCCGAAACCCTCGGCGGCGCCGCCTCCTTCATCTCCAACGTCCTCGACTCTTCCTCCG
TCTCCTGCCATCTGATCTCCAAAGTCGGCCGCGACTTCAAATACCACCACGACGTCGCCCACCCCCCGATCGTGGCTCCGGCCAAG
GAGACCACCGTCTTCGAAGCCTATTTCGATCTCGGAATCGGACACTCCGATCGGGTCCTGAAACGGGTCGCTGCATGCGACCCGAT
CCTCCCTTCCGACATCCCCGACTCGAGGTACGCCATCGGGATGGCCGTCGGCGTCGGAGGGGAGATTCTCCCGGAGACGCTCGAGA
AGATGGTGGAGATCTGCGACGTGGTGGCCGTAGACATACAAGCTCTGATCAGAGTTTTCGATCCCGTCGACGGAGGAGCCGTGAAG
CTCGTGGATTTGAGAGAGAGCGGGTTTCAACACCTCATGGATAGGATCGGGTTCTTGAAAGCTTCCTCGGACGAAGCTTTGTTCAT
GGACGTCGAAGAGATGAGGCGTCTGTGCTGTGTGGTGGTGACTAGCGGCGAAAAGGGTGTCGGATTTACGACAAGGATGATGAGAC
GGTGGTTCCTCCGTTTTTTGGCGAAGCAGGTGGATCCGACCGGGGCTGGGGATAGTTTTCTCGGGGGGTTGGTGGTTGGTCTTGTT
GAGGGTTTGGATGTTCCTGATGCTGCTTTGTTGGGGAACCTCTTTGGTTCCGTCACTGTTGAACACATTGGTCAGCCTAAGTTCGA
TTTGACTATGCTTCAGAGAGTGAAAGATGAGGTACAGAGAAGGAAGAAGCAATGTAATCTGTCAAGCAGCCATAACAATGATCATG
ACGAGTTTCATGCGCGTCTAAGTCCAGCCCGGTTTCAGGACTCTCCACTTCAACCAAAGTTATTGGTCAATGGTCACTTATGTGAT
GACCGGTCATGATTGGTAGCCTGCAAATACGAATCTTTTAATCACGTTTAATCAATCACTAACAGCGCCTATTCTGAGTTGTGTAA
ACTTTCCATGTTTATGAATTTGGAAAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200681 pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana] | 1412 | 2e-153 |
| XP_002866288 pfkB-type carbohydrate kinase family protein [Arabidopsis lyrata subsp. lyrata] | 1395 | 2e-151 |
| BAA97341 unnamed protein product [Arabidopsis thaliana] | 1162 | 2e-124 |
| ACV71014 UPA14 [Capsicum annuum] | 894 | 2e-093 |
| XP_002866289 nuclear movement family protein [Arabidopsis lyrata subsp. lyrata] | 697 | 1e-070 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q93Z01 AT5g58730/mzn1_180 | 1412 | 1e-153 |
| Q9LUY8 Genomic DNA, chromosome 5, P1 clone:MZN1 | 1162 | 1e-124 |
| B9HP38 Predicted protein | 1013 | 2e-107 |
| B9GIH9 Predicted protein (Fragment) | 957 | 7e-101 |
| C8YZA7 UPA14 | 894 | 1e-093 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G58730.1 pfkB-type carbohydrate kinase family protein | 1412 | 6e-156 |
| AT5G58740.1 nuclear movement family protein | 693 | 1e-072 |
| AT3G24550.1 ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1); ATP binding / protein kinase | 121 | 3e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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