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Information for unigene UN26167

FASTA Sequence
Unigene ID: UN26167Length: 395  SNP
GGGGTCCACCTTTGAGAAAAAATGGCAAGCAATATGGAAGTTTTCTGCGAGATCTTGATCGCAGTCCTTCTTCCTCCTCTTGGAGT
CTGCCTCAAGCGTGGCTGCTGCACTGTAGAGTTCTTGATATGCTTGGTGTTGACTATCTTAGGCTACATCCCAGGGATAATCTATG
CTATTTACGTGATCGTGTTTCAGAACCGTGAAGGGGAAACTCAGGACTACAGTGCTCCACTCAACTCAGCTTGAGACTATCTGCTG
GTCCATTCAATGTCTTTGAAACTGTTTTACTTATGTAATGTAACCATTAAATAAGTTGCTATGCAATCTCATCGGTTTCCTTATCA
TGTATATTCAGCTATTCAAGTCATGCCAATTTCATAGAATGACTTTTGACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAT11798 salt and low temperature response protein [Brassica rapa subsp. pekinensis]3812e-035
AAV35467 cold and salt response protein [Brassica napus]3732e-034
NP_194794 putative low temperature and salt responsive protein [Arabidopsis thaliana]3392e-030
XP_002869366 hypothetical protein ARALYDRAFT_913410 [Arabidopsis lyrata subsp. lyrata]3266e-029
XP_002869365 hypothetical protein ARALYDRAFT_913409 [Arabidopsis lyrata subsp. lyrata]3079e-027

Swiss-Prot top hits (Blast detail)Scoree value
Q9M095 UPF0057 membrane protein At4g306503396e-032
Q9SUI0 UPF0057 membrane protein At4g306602966e-027
O82232 UPF0057 membrane protein At2g240402536e-022
Q9LRI7 Hydrophobic protein OSR82043e-016
Q9ZNQ7 Hydrophobic protein RCI2A1774e-013

TrEMBL top hits (Blast detail)Scoree value
Q6GYJ6 Salt and low temperature response protein3812e-035
Q5URQ9 Cold and salt response protein3731e-034
C0SVK6 Putative uncharacterized protein At4g30650 (Fragment)3391e-030
B9DGR8 AT4G30660 protein2914e-025
B9STT9 Hydrophobic protein OSR8, putative2682e-022

Arabidopsis top hits (Blast detail)Scoree value
AT4G30650.1 hydrophobic protein, putative / low temperature and salt responsive protein, putative3433e-033
AT4G30660.1 hydrophobic protein, putative / low temperature and salt responsive protein, putative2977e-028
AT4G30660.2 hydrophobic protein, putative / low temperature and salt responsive protein, putative2977e-028
AT4G28088.1 hydrophobic protein, putative / low temperature and salt responsive protein, putative2573e-023
AT2G24040.1 hydrophobic protein, putative / low temperature and salt responsive protein, putative2539e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  36%
 
97  64%

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