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Information for unigene UN26169

FASTA Sequence
Unigene ID: UN26169Length: 961 SSR 
GGGAACACAAATCGCGACACCAATGGCGGCGACAGAGGAAGAGATGCCGACGACGACGAAGGAAGGCGCTAACCTACTGGGGAAGC
CAAAGTATAAGAAACTGGAGAACGGGAGATTCAGATGCGTGCAAACGGGTCACGAGCTCCTCGAGAAAGACAAGAAGGTCTATTCA
GAGAGCAAACGGTGCCGTTTAGGGCTTATCGACCACGCCTTGTCCCACAGCAAGCCTCCTCTTAACTTGTTTGAGCAAGACCCTAG
CTCTCGTTCAAAGCTGCTGTGTAAGCTTACGGGTGACACGGTGAACAAGACTGAGGAGCATATTTGGAAGCATATCAATGGACGCC
GCTTCCTTAACAAACTAGAGGAGAAGGAACGAGAGAATGAATCTGGGATTGTTCCTGAGGAAGGTGGAGAAACTGTGGCGAAAGAG
GATGGTGTAAAGGAAGGAAAGAAGAAGAACAAAAAGAAGAAGAAGAAGGATAAGAAGAAAAAGAAGAACAAGGAGTTAGATAAAAA
GGAAGAGAGTGGAGAGGATGTTACTGATGGAGCTGAACATGGAAATGATGAAGATGTTGAGGAGAGAGAGCTTGACTTTTGGATGC
CGCCAGATGGAGAGAGGTGGGACTTTGATGATGGTGGAGACCGGTGGGGATCAGATTCGGACACGGAAGATGATCCAATAGGTGAG
ATTGATGAAGATGGAAAGACTAGTTTGGATGACTGCATAATAGGTGAAGTTGATGAAGATGGCGAAAATAGTGTGGATGAGACTCA
TGAAAGTAAAAAGAGGAAACCTGAAGAAGTCAGTTCCAGCAACCTTCCTTCGAAGAAGAAGAAGAAGAAGAAGAACAAGAAGGTCA
AAACAACATTGTCATAAGTCTTATATGTTCTCTCTCTTTCTCTCTGTTGTTGTTCCTTTTTTGTGTATTACTCTGTTCTTCAATTC
ATGGGATCAGTTTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873667 hypothetical protein ARALYDRAFT_488286 [Arabidopsis lyrata subsp. lyrata]11572e-124
NP_001031882 Surfeit locus protein 2 (SURF2) [Arabidopsis thaliana]10943e-117
NP_196948 Surfeit locus protein 2 (SURF2) [Arabidopsis thaliana]10836e-116
XP_002521492 conserved hypothetical protein [Ricinus communis]6615e-067
BAH19752 AT5G14440 [Arabidopsis thaliana]6411e-064

Swiss-Prot top hits (Blast detail)Scoree value
Q17RH7 Putative protein TPRXL1291e-006
O94317 Uncharacterized serine-rich protein C215.131262e-006
P87179 Cell wall integrity and stress response component 11236e-006

TrEMBL top hits (Blast detail)Scoree value
Q9LY85 Putative uncharacterized protein At5g1444010996e-118
Q6NPE4 At5g1444010834e-116
B9S673 Putative uncharacterized protein6614e-067
B9DG85 AT5G14440 protein (Fragment)6417e-065
B8AVH5 Putative uncharacterized protein5091e-049

Arabidopsis top hits (Blast detail)Scoree value
AT5G14440.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Surfeit locus 2 (InterPro:IPR008833); BEST Arabidopsis thaliana protein match is: surfeit locus protein 2 family protein / SURF2 family protein (TAIR:AT5G40570.1); Has 6513 Blast hits to 4273 proteins in 255 species: Archae - 4; Bacteria - 122; Metazoa - 2676; Fungi - 730; Plants - 236; Viruses - 90; Other Eukaryotes - 2655 (source: NCBI BLink).10993e-120
AT5G14440.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Surfeit locus 2 (InterPro:IPR008833); BEST Arabidopsis thaliana protein match is: surfeit locus protein 2 family protein / SURF2 family protein (TAIR:AT5G40570.1); Has 6533 Blast hits to 4299 proteins in 259 species: Archae - 4; Bacteria - 127; Metazoa - 2727; Fungi - 698; Plants - 260; Viruses - 77; Other Eukaryotes - 2640 (source: NCBI BLink).10886e-119
AT5G40570.1 surfeit locus protein 2 family protein / SURF2 family protein4131e-040
AT5G40570.2 surfeit locus protein 2 family protein / SURF2 family protein3951e-038
AT3G29075.1 glycine-rich protein1163e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  100%

Unigene MembersMember information