 |
Information for unigene UN26189
| FASTA Sequence |
| Unigene ID: UN26189 | Length: 1154 |
| SNP | GGGAGATAGGCAAAGGCGAACAACACTTCCTCTGGAAACGAAATGCCGATTTCTCCTTCCTTGTTGTCATCCTCTTCCTCAGTCTC
TCAGCTCCTCCCTAGACTCCCAAACTCCGCCAGGTTCAATGCACCCGCTTCACGTAGCAGAGCCGTCACCGTCGTGGCAGCATCCG
TCACCGACCTATCCAGCGTGGACAGCACGACCATCGCCGTGCTGGGAGGAGGATCAGTCGCAGCTCTGGCGACGATCGTTTCCCTA
ACGGATCCGGAGAGGAGGCGGAAGCTGCAGGCGGAGGAAGTCGGAGGAGGAGACAAGGAGGTGGTGAGGGAGTACTTCAACAGCAC
CGGGTTCGAGCGGTGGAGGAAGATCTACGGCGAGACCGACGAAGTGAACCGCGTCCAGAAGGATATACGGATCGGCCACGCCAAAA
CCGTCGAGAAGACGATGCTCATGCTGACGGAAGAAGGTTCGCTGGCCGGCGTAACGGTCTGCGACGCTGGTTGCGGAACAGGTCTG
CTCTCGATTCCGCTCGCTAAGGAAGGTGCGATCGTCTCCGCTAGCGATATCTCTGCAGCTATGGTCGCCGAAGCTGAGATGAAGGC
AAAGCAGCAGTTATCATCTGAGAATCTACCGAGATTTGAAGTAAATGATTTAGAGAGCCTGAGTGGGAAGTATAACACCGTTGTCT
GCCTGGACGTGCTCATACATTACCCTCAGAACAAAGCTGACGGGATGATCGCACACCTCGCTTCGTTAGCTGAGAAGAGAGTGATT
CTTAGCTTCGCACCGAAGACGTTCTATTACGATATCTTGAAGAGGATCGGAGAGCTTTTCCCAGGTCCTTCGAAGGCTACAAGGGC
GTATCTACACTCAGAGGCGGATGTTGAAAACGCATTGCGCAAGGTCGGGTGGAGAATCAGCAAGAGAGGACTCATTACCACCCAGT
TCTTTCTCTAGGCTTATCGAAGCAGTTCCAATGTAGACCAGTTTTGAAAGAAAAAGGCATTCATCTGTTGATTATTATTGAGGATA
GTGTCTACAAACATGCACTTCTTCAGGACTTGGTCTATAGTTCTGTAGCTCCTCTTTCACTGTTTAATGTAATCAAATGTAATATG
TAACTTGGGGATATATATGCTCAGGAGCTCTTGCAG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_194238 magnesium-protoporphyrin IX methyltransferase [Arabidopsis thaliana] | 1364 | 2e-148 |
| XP_002869689 magnesium-protoporphyrin ix methyltransferase [Arabidopsis lyrata subsp. lyrata] | 1359 | 8e-148 |
| BAH19415 AT4G25080 [Arabidopsis thaliana] | 1357 | 1e-147 |
| NP_001119052 magnesium-protoporphyrin IX methyltransferase [Arabidopsis thaliana] | 1125 | 1e-120 |
| XP_002511093 Magnesium-protoporphyrin O-methyltransferase, putative [Ricinus communis] | 1101 | 7e-118 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q55467 Magnesium-protoporphyrin O-methyltransferase | 652 | 3e-067 |
| P26236 Magnesium-protoporphyrin O-methyltransferase | 205 | 2e-015 |
| B6J5Y2 3-demethylubiquinone-9 3-methyltransferase | 140 | 8e-008 |
| B6J1W2 3-demethylubiquinone-9 3-methyltransferase | 140 | 8e-008 |
| A9KGL7 3-demethylubiquinone-9 3-methyltransferase | 140 | 8e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SW18 AT4G25080 protein | 1364 | 1e-148 |
| B9DF98 AT4G25080 protein | 1357 | 9e-148 |
| B3H4K6 AT4G25080 protein | 1125 | 7e-121 |
| B9RA68 Magnesium-protoporphyrin O-methyltransferase, putative | 1101 | 4e-118 |
| D4TUT5 Magnesium protoporphyrin O-methyltransferase | 678 | 5e-069 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G25080.3 CHLM (magnesium-protoporphyrin IX methyltransferase); magnesium protoporphyrin IX methyltransferase | 1369 | 2e-151 |
| AT4G25080.1 CHLM (magnesium-protoporphyrin IX methyltransferase); magnesium protoporphyrin IX methyltransferase | 1369 | 2e-151 |
| AT4G25080.2 CHLM (magnesium-protoporphyrin IX methyltransferase); magnesium protoporphyrin IX methyltransferase | 1369 | 2e-151 |
| AT4G25080.4 CHLM (magnesium-protoporphyrin IX methyltransferase); magnesium protoporphyrin IX methyltransferase | 1125 | 4e-123 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
