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Information for unigene UN26192

FASTA Sequence
Unigene ID: UN26192Length: 947  SNP
GGACATCTCCTCAACCTCCATTGTTGGAAACATCATATCCTTCCATATCATCCAACTTTGAGTATAACATTTTGCTCTCCTCTCTA
CTTCTCTTCAAGATCCAGTAATATCACATGGCTGAGGTTATGCTACCGATGAAAATGGAGATGGCTAACGCTCCTTCCAAGTTTAA
ATCACCTGATCTTCTTCATGTTCTCGCCGTCGACGATAGCCACGTTGATCGGAAATTCATAGAGCGCTTGCTCAAAGTCTCTTCCT
GTAAAGTTACTGTTGTTGATAGTGCCACAAGAGCTTTGCAATACCTTGGACTGGACGTAAACGAGAAACCCGTTGGTGTTAAGGAT
TTGAAAGTTAATTTGATTATGACGGATTACTCTATGCCCGGAATGACTGGATATGAACTCTTGAAGAAGATCAAAGAATCCTCAGC
TTTCAGAGATGTGCCTGTGGTTGTTATGTCCTCTGAGAACATTTTGCCTCGTATTGATAGATGTCTTGAAGAAGGTGCTGAAGATT
TCTTATTGAAGCCTGTAAAACTTTCGGATGTAAGAAGAATAAGAGATTCTCTGATGAAAGCTGAAGTAGATCTATCTTTCACGAAG
AGTGTTAACAAGAGAGAGCTAGAAACAGAGAATGTCTACTCTTTGGATTCATCTGTTCCCTCACAACAGCTCAAACGCACAAAGAT
CTGAGCTTTTCCCAAAGCAGAATCCCATGACATGGGCTTAAAAAGGCTTAATCACCTATACAATTTTCCACCCCCTTGCGTCTTCT
TTTTTTGCTGAGTAAAACTCTCAGTGTTGACAGAGAAACAGGGCTTATTCACATGACTGTTAGCGATGTAAATGGTAGAGATAAAC
CAATTATATTATTATTCATTAGAGATGTCATGTTTTTTTCTTCTTACAAGAGATTGTAAGCTGGTTTTATGAAAGTTGGCTAATTA
T

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34561 unnamed protein product [Thellungiella halophila]8013e-083
NP_201097 two-component response regulator ARR6 [Arabidopsis thaliana]7744e-080
XP_002866522 hypothetical protein ARALYDRAFT_496477 [Arabidopsis lyrata subsp. lyrata]7682e-079
XP_002877596 hypothetical protein ARALYDRAFT_906046 [Arabidopsis lyrata subsp. lyrata]6732e-068
XP_002511471 two-component sensor protein histidine protein kinase, putative [Ricinus communis]5674e-056

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZWS6 Two-component response regulator ARR67742e-081
Q9SB04 Two-component response regulator ARR56641e-068
Q9ZWS7 Two-component response regulator ARR75214e-052
Q7G8V2 Two-component response regulator ARR155189e-052
O82798 Two-component response regulator ARR44856e-048

TrEMBL top hits (Blast detail)Scoree value
Q0WSS6 Response regulator 67743e-080
Q0WW39 Response reactor 26642e-067
B9R8Z6 Two-component sensor protein histidine protein kinase, putative5673e-056
B9IEK8 Type-a response regulator5503e-054
B9IEK9 Type-a arp3-like response regulator (Fragment)5503e-054

Arabidopsis top hits (Blast detail)Scoree value
AT5G62920.1 ARR6 (RESPONSE REGULATOR 6); transcription regulator/ two-component response regulator7769e-083
AT3G48100.1 ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator6649e-070
AT1G19050.1 ARR7 (RESPONSE REGULATOR 7); transcription regulator/ two-component response regulator5213e-053
AT1G74890.1 ARR15 (RESPONSE REGULATOR 15); transcription regulator/ two-component response regulator5188e-053
AT1G10470.1 ARR4 (RESPONSE REGULATOR 4); protein binding / transcription regulator/ two-component response regulator4855e-049

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  33%
 
82  22%
 
72  22%
 
112  22%

Unigene MembersMember information