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Information for unigene UN26200
| FASTA Sequence |
| Unigene ID: UN26200 | Length: 1105 |
SSR | | CCTCAATGTTTTTTATAATATTGGAAAAGCTTAGAAGGTTTAACCAGATCATAATCTTTTTACTTAGAAAGAAAGCCCTAAACAGA
AGGCCCAGAGGTTTAACCAGATAATAATCTTTTACATTGAAAGAAATACCCTAAACAGAAGGCCCAAATAAGATTAGCTAATATTT
CGTGGGAATAAATATGTTATCATAGTTGTGCTTGTGGGATCCTGAGCAAACTGGTAGCACCTTCATCATCAGAGGAAGATGATGGG
ATCTCTCCTTGAAGATTCACTTGAGGTGTAGTTGTCTGCTCAACCATTTCTTTCTTCTTCCTAAAAACCTTGGAGACACACATCTC
AGAATGGTTTTCCAGCTTGAATTCCTCCATTCGCCATTCACTTGGCTCTTCCTTTGTGCCGTTCTTCAAGAAGAAGCTATACGGCA
TCTTTGTGCCCTTGAGATCACTGTTGGGGTCTTTGAACTCTTTCTTGCGACTACCTCGTCTCCATCTCCCGTGGGGAGTGTCGCGC
TTGGTACGAGGGCCACTTTTGTACCTACTCTGTAGGTTGGTAAAAAAGTACCACTCCTCTGTGGATTTGAGCTTGGAATGACCTGC
TAAGTCCCAGGGATCGTGCTTGTAGATGTCAAGATCTGCAATGGCATCAGTCACCTCTTCGCTCAAGACTTTCCCCTTGAGGTAAT
AGAACAGCGTTTGCTCATCAGTAGGTCGAAAAAGGAACCCTGGAGGAAGTGATACTGTCAACTGGAAAGTCTCTTCCGCTGAGGAA
ATGTTTACCGGCGGCGGCGGCGGCTGCGTCGAAACGGGATCAGCTACGTCCATCGGCGGCAAAGACACGGGATTAGCTTCATATTC
AGGCTCCATCTGCGCAGGGTTGTAGAGAAAGAGTATTTCTTTTTCCGATCCCCCCGGCCGTAAGCAGTGGTATCAACGCAGAGTGT
CGAAAACATTTGACAGAACCCACTGTAGCCAAAGGTGAAGCTAAAGAGCTTCCTAACATTTCCTGAACTGCGAAGATACTCTTTAA
CTTGGTCGCTAGCTAATCAGAAACACTGAGTCAGATATGAAACCGTTGGCATTGAGAAGGTTAGGTGTCCCCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAN63961 hypothetical protein VITISV_028424 [Vitis vinifera] | 245 | 1e-018 |
| XP_002313601 NAC domain protein, IPR003441 [Populus trichocarpa] | 245 | 1e-018 |
| XP_002272914 PREDICTED: hypothetical protein [Vitis vinifera] | 245 | 1e-018 |
| CAN80239 hypothetical protein VITISV_011820 [Vitis vinifera] | 241 | 3e-018 |
| CBI29917 unnamed protein product [Vitis vinifera] | 241 | 3e-018 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q84K00 NAC domain-containing protein 78 | 252 | 7e-021 |
| Q9MA17 Protein SOMBRERO | 242 | 1e-019 |
| Q5Z6B6 NAC domain-containing protein 76 | 239 | 2e-019 |
| Q9FWX2 NAC domain-containing protein 7 | 239 | 2e-019 |
| Q9C878 Protein BEARSKIN1 | 235 | 7e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5BXG9 Putative uncharacterized protein | 245 | 8e-019 |
| B2ZGR5 NAC domain protein | 245 | 8e-019 |
| B9HQ28 NAC domain protein, IPR003441 | 245 | 8e-019 |
| A5AMZ3 Putative uncharacterized protein | 241 | 2e-018 |
| Q9FTY0 Os01g0104500 protein | 240 | 3e-018 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G10480.1 no apical meristem (NAM) family protein | 263 | 4e-023 |
| AT3G10480.2 no apical meristem (NAM) family protein | 263 | 4e-023 |
| AT3G10490.1 anac052 (Arabidopsis NAC domain containing protein 52); transcription factor | 261 | 6e-023 |
| AT3G10490.2 anac052 (Arabidopsis NAC domain containing protein 52); transcription factor | 261 | 6e-023 |
| AT4G36160.1 ANAC076 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 76); transcription factor | 250 | 1e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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