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Information for unigene UN26207
| FASTA Sequence |
| Unigene ID: UN26207 | Length: 856 |
SSR | | GTTCACAAACGATTCCGATTTGTTATTACATTATCCGACATGAAACATAGAAAGCTCCAAGCCTCCAACATAAGAGAAGACAGCAA
ACAAAACACAAACAGAGAAAAAGAAACGGGATCAAAGAGCTTTAAGCATATCCTCAGCACTACTGTTGGTAAAAGCGCCTCCTTCT
TCAAGATTCAGAACCTTGACAACACCATCCTCCGCCAGAATCGCGTACCTCCTCGACCTAACTCCGAGTCCCACAGGCTTATCCCT
CAAATCCAACTCGACGCCAAGCTTCCCCGTGAACTCTCCGTTACCATCGGATAACAGCATCACCTCGTCGTTGATCCCGAGGTCCT
TCCTCCACGCCTCCATCACGAACGCGTCGTTCACGGAGACGCACGCGATGACGTCGACGCCTTTGGATCTGAGCTCTCCCGCTTTG
GAGACGAATCCGGGGACGTGTTTCTGCGAGCAGGTCGGAGTGAAGGCTCCCGGGACGGCGAAGAGGATGGTTTTCTTCCCGGCGGT
TAGGGAGGAGACGGTGACTGTTTTGACGTCGTTGGTGGCGGGGTCGAGGTAGGAGAGAGTGGAGTCTGGGAGTTTGTCTCCGACGG
AGATGGCGGAGGTGATGGTTGTTGAGAAGGATCTGGTGGCGGAGACGGAGATGCGGCGGGTGTTGGATTTGAGGGAGAGGTTAGGA
GCGAGAGAGCGCGTGAAAGATAAAGGCGCCGTGAAGGTTGGGGAGAGTAACGGTTTGGCGATGGATATGGCGGTGGCTGAGGAGGA
GGAGGAGGAGAGGAGTCTGGAGACAGAGAGAGAAGTTGCCATGGATGATGGTGTTGAGCGGTTCAAATGAAATGTTTGGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_190864 peroxiredoxin-2E [Arabidopsis thaliana] | 1000 | 2e-106 |
| AAK92817 putative peroxiredoxin protein [Arabidopsis thaliana] | 996 | 6e-106 |
| XP_002876176 hypothetical protein ARALYDRAFT_485670 [Arabidopsis lyrata subsp. lyrata] | 975 | 2e-103 |
| BAK02140 predicted protein [Hordeum vulgare subsp. vulgare] | 721 | 5e-074 |
| XP_002528579 peroxiredoxin, putative [Ricinus communis] | 710 | 9e-073 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q949U7 Peroxiredoxin-2E, chloroplastic | 1000 | 9e-108 |
| Q69TY4 Peroxiredoxin-2E-1, chloroplastic | 687 | 2e-071 |
| Q7F8S5 Peroxiredoxin-2E-2, chloroplastic | 670 | 2e-069 |
| Q9XEX2 Peroxiredoxin-2B | 476 | 5e-047 |
| Q9SRZ4 Peroxiredoxin-2C | 469 | 4e-046 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SRG0 Peroxiredoxin, putative | 710 | 6e-073 |
| A2YF78 Putative uncharacterized protein | 687 | 3e-070 |
| B7E2V4 cDNA clone:001-015-H12, full insert sequence | 687 | 3e-070 |
| A3BDQ3 Putative uncharacterized protein | 684 | 6e-070 |
| B6T2Y1 Peroxiredoxin-5 | 682 | 1e-069 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G52960.1 peroxiredoxin type 2, putative | 1001 | 7e-109 |
| AT1G65980.1 TPX1 (thioredoxin-dependent peroxidase 1); antioxidant/ oxidoreductase | 485 | 4e-049 |
| AT1G65970.1 TPX2 (thioredoxin-dependent peroxidase 2); antioxidant/ oxidoreductase | 478 | 3e-048 |
| AT1G60740.1 peroxiredoxin type 2, putative | 478 | 3e-048 |
| AT1G65990.1 type 2 peroxiredoxin-related / thiol specific antioxidant / mal allergen family protein | 335 | 1e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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