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Information for unigene UN26215
| FASTA Sequence |
| Unigene ID: UN26215 | Length: 2125 |
| SNP | GCAACATGGGCAACTGAGCTGTATCTGGACAAGATAAATCGGATACTTTTGGAAGATGATACTGCTATAGAAAACCGTAACTCAGA
GTATCACTCAGTCATTCAAGAATTCCGTGCTTTCATGAGCGACTGCAAGGATGTATTAGATGAGGCAACCACCATGAAACTTCTAG
AGAGTTATGGTCGGGTTGAAGAGTTGGTATATTTTGCAAACCTGAAGGAGCAATATGAAATCGTTATTCACCATTATATTCAGCAA
GGGGAAGCAAAGAAAGCTTTGGAGGTGCTCCAGAAATCTTCAGTTTCAGATGAACTTCAGAACTTATCATGCTCGACGCGTATGAA
ACCGTGGAAGCATGGATGGCCAGTAAAAATCTTAATCCAAGGAGACTGATTACTGCAATGATGCGTTACTCAAGCGAACCACATGC
AAAGAACGAGACACATGAAGTCATAAAATACCTTGAGTTTTGCGTCCATAGTTTGCATAACGAGGATCCAGGGATTCACAATTTAC
TTCTCTCATTATACGCCAAGCAGGAAGATGACAGTGCCCTCCTCCGTTTCCTGCAATGCAAATTTGGGAAAGGACGAGAGAACGGT
CCTGAATTTTTCTACGATCCCAAATACGCGTTGCGCCTGTGTCTCAAGGAGAAGAGAACTCGTGCTTGTGTCCATATATACAGCAT
GATGTCTATGCATGAAGAGGCGGTGGTCCTTGCTCTTCAGATTGACCCAGAACTTGCTATGGCTGAGGCTGGTAAGGTTGAAGATG
ATGAAGACTTGAGAAAGAAGCTGTGGCTGATGGTTGCTAAGCATGTCGTCAAACAGGAAAAGGGAGCGAAAAGGGAAAACATAAGG
AAAGCGATTGCCTTTCTCAAGGAAACTGATGGACTTCTAAAGATTGAAGATATTTTGCCATTCTTTCCGGACTTTGCCTTAATTGA
TGATTTCAAGGAAGCGATTTGCTCATCTCTGGAGGATTACAACAAGCAAATAGAACAATTGAAAGAGGAGATGAATGATGCCACAC
GTGGTGCAGATAATATTAGAAATGACATCAGTGCCCTAACTCAAAGATATGCTGTAATCGACCGTGAAGAGGAATGCGGGGTTTGT
AAACGTAAAATCTTGACGATGACCGGGGATTTCAGAATGGCTCAGGGATATACTTCATCCGGACCACTGGCTCCTTTTTATGTTTT
TCCTTGTGGGCACTCTTTCCATGCGCAGTGCTTGATTACACACGTCACAAGCTGTGCACACGAGGAGCAAGCCGAGCATATACTCG
ATCTGCAGAAGCAGCTGACATTGCTTGGTAGCGAAACCCGGAGGGATATAAATGGTAATCGATCTGATGAACCTGTAACTAGCACA
ACTACTGCAGACAAGCTTCGATCAGAGCTAGATGATGCTATCGCCAGCGAATGCCCCTTCTGTGGAGAATTAATGATCAATGAGAT
CACTCTACCTTTTATCAAACCTGAGGAAACACAACACTCTGCTTCATGGGACCTTCGACCACTGACCAACTTAGCGAACCAGAGGA
CCATTTCTTTACCTGTTTGATTTGTGTAACACCGTGATAGCTTTGGAGTTGTGAATGTGATTTTGAGTGCGAATGTAATATTATTA
TTAAACATGCTTCTTGAGATACATACAATAAGTTTGATACCTACTTGTAACTCTATAATCTAAATGCTCTCTTGACTTATTTCAAT
CTGAAAATATCCTTTTGTTGTTCGTGATTTTCATCAGTGATGCGATTCGTCATCGGGTTCAATATCCTTTTCTGCAGATATTTTCT
TGGCCAGAGCCTGCTTGCTCCAGCGCTTCAAGTCATAAGCTCTTTTGAAAGGTTTCTTCTCCTTGCTAAGTCTTTTATTTGTAATA
GCGATTGCAAGATCGTTCGGGAACAAAGTTTGCCAGACAAAGCCGTGGAGAAGCGTGGAGACGAACAAAACGCAGACCATGGCCGA
AGAAAAGAAGGAAAGAGTGAGTGCTAGAGCTCGGGTTGGGACACAAGGTACTGCTTCCGCATACTTTATTGTTGCTACTGAGGCTG
TTGTCATAGGAAAAGTATATGACCACCACGCCACTGAGAACTTAAACCCGGTGAAGAAATT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889937 T12C24.2 [Arabidopsis lyrata subsp. lyrata] | 2100 | 2e-233 |
| NP_172709 zinc ion binding protein [Arabidopsis thaliana] | 2081 | 3e-231 |
| XP_002517993 vacuolar membrane protein pep3, putative [Ricinus communis] | 1845 | 8e-204 |
| XP_002271384 PREDICTED: hypothetical protein [Vitis vinifera] | 1810 | 9e-200 |
| XP_002319385 predicted protein [Populus trichocarpa] | 1785 | 7e-197 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P59015 Vacuolar protein sorting-associated protein 18 homolog | 595 | 3e-060 |
| Q9P253 Vacuolar protein sorting-associated protein 18 homolog | 552 | 3e-055 |
| Q8R307 Vacuolar protein sorting-associated protein 18 homolog | 550 | 5e-055 |
| Q24314 Vacuolar protein sorting-associated protein 18 homolog | 364 | 2e-033 |
| O74925 Vacuolar membrane protein pep3 | 322 | 1e-028 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RW74 Vacuolar membrane protein pep3, putative | 1845 | 5e-204 |
| B9I6A6 Predicted protein (Fragment) | 1785 | 5e-197 |
| Q6ZKF1 Os08g0178100 protein | 1556 | 2e-170 |
| C5YHX2 Putative uncharacterized protein Sb07g004940 | 1555 | 2e-170 |
| Q9LN91 T12C24.2 | 1402 | 1e-152 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G12470.1 Pep3/Vps18/deep orange family protein | 2082 | 9e-234 |
| AT1G12480.1 OZS1 (OZONE-SENSITIVE 1); transporter | 570 | 2e-058 |
| AT5G24030.1 SLAH3 (SLAC1 HOMOLOGUE 3); transporter | 238 | 6e-020 |
| AT4G27970.1 SLAH2 (SLAC1 HOMOLOGUE 2); transporter | 223 | 3e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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