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Information for unigene UN26220

FASTA Sequence
Unigene ID: UN26220Length: 1489 SSR 
GGGTCTGATGGGGGTCGAGAAAATAAATTAGAAAAGAGTTTCTGTCTGTTTCTTTCTTCCACCCTCTGAGCCAGTGAGCCGCCTTC
CCTTCCTTGTTACTCTCCTCTCGCTCAACCGGTTCCTCCCAAGCAAGCAAGCAAGCAAGCAAGAAGCTGCTTTCGAACTTCCTTTT
CGTGCCCTCGTTTCTAATCAGAAGAAAGAGTCTTTGATTAGCTCAAAAGAGACCACTACAGACATGTCTGAATCGAAGGATGAGAA
AGCACAGGTTGCAGCCGACAGGATCAAGGCCGCAGCACTCACTGCTTCCAAAGGTTTAAGCCGTACCCAAGCCGAGCGAGCAGCGG
CTGCAGCTTCCAGGAACGTCAACGCTTACGGTCAGAAGGAAGAAGGTCCGAGCAGATGGCAGGAGAAGAGGGAAGCCAAGAGGCAG
ATGTATCTGATGAGTACCGAGAAAGCCGTCAGGCTTGGGGAGAGGAAGGACAAGTCGGTGTCGGCATCTGTCGTGGGAGGAGGAAG
CAGCTTGGCGGCTTCGCAGTGCCAGAAGTGTTTCCAGACGGGGCACTGGACTTATGAGTGCAAGAACGAGAGGGTTTACATCTCTA
GGCCTTCCAGAACCCAGCAGCTTAAGAACCCTAAGCTGAGGATGAAGCCTTCTGTTGATGATCTTGGTGATGATGAGAAGGTAGAT
GCAGGAAACGGGAAAGATGATGAGGAAGGTGAGAGGCGGTCGTCTAAGAAGAGCAAGAGAAAGCAGAGGTCGAAGTCTGATTCCGG
GAGTGATAGCGAAGCCTCTGTGTTTGAAACAGATAGTAGTGACGGCTCTGAATCATTTGGAGAGAGTGATTCTGAATACAGTTCGT
CGTCTGACTCAGAGGAGGAAAGGAGGAGGAGAAGGAATAAGAGGAAGAGCAAGAAGAAGCCAAAGCAGAGGAAGGAGAGGCAAAGG
AGAAGAAGATACAGCTCTTCTTCATCTGAGGAGTCATCTGATTCAGAATCAGCTTCGGACTCTGATTCTGATGAAGACAGAAGAAG
CAGTAGAAAGAAGAAGAGCAAGAAGAACAGCAGCAACAAACGTCGTTGAGTTGGGTTTTAGGAAAATCTGAAGTGGATGATGAATA
CTTTTTTCTATATGCGTTGTTTTTAGAGTGAGTGAGTCATTTTGAGCTACATGAAGAATACTCGCAGCTTCTTTTTCTCATGTTTC
AACTTTCCCTTTTCTCAGCCATTCATGGCTTTGTGTTGTAGTAAACTGATGGATTTGAGAATCTCTTTTAGTTTTCAGAACTCGGT
AGACACGCAAGAAAGAAAAAACAACCTTTCAAGAGTATCCTCAGGTATACCGCAGGAAATTACAAAAGGTTGGTAAACGTCGAGGG
GCTTGTTTATAAATATTCATACATTATGATATCGTTGATGATGATGATGATGATGTGAAGGGCTTGTTTTTTGTAAGTTATTTGTT
GATTTATATAGTAGTGACTTATTACTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002863980 hypothetical protein ARALYDRAFT_494997 [Arabidopsis lyrata subsp. lyrata]10472e-111
BAB09910 unnamed protein product [Arabidopsis thaliana]10302e-109
NP_199751 zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]10292e-109
XP_002312338 predicted protein [Populus trichocarpa]8643e-090
XP_002314930 predicted protein [Populus trichocarpa]8232e-085

Swiss-Prot top hits (Blast detail)Scoree value
P32583 Suppressor protein SRP401793e-012
Q21278 Pre-mRNA-splicing factor SLU71686e-011
Q9Z1T1 AP-3 complex subunit beta-11661e-010
Q5ZLX5 Zinc finger Ran-binding domain-containing protein 21632e-010
Q5M9Q1 NKAP-like protein1623e-010

TrEMBL top hits (Blast detail)Scoree value
Q9FGX7 Similarity to unknown protein10301e-109
Q6NMK2 At5g4940010291e-109
B9HIQ5 Predicted protein8642e-090
C6TEM3 Putative uncharacterized protein8354e-087
B9HWY1 Predicted protein8231e-085

Arabidopsis top hits (Blast detail)Scoree value
AT5G49400.1 zinc knuckle (CCHC-type) family protein10404e-113
AT5G53800.1 unknown protein2223e-018
AT4G02720.1 unknown protein1982e-015
AT3G63400.2 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein1604e-011
AT3G63400.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein1571e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  13%
 
94  50%
 
63  38%

Unigene MembersMember information