Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN26222

FASTA Sequence
Unigene ID: UN26222Length: 1768 SSR 
GGGACGAAGAAGAAGAAGAAGATAACGAAACACACACACACTCAAGCATGAACGGAGCTTCGCTCTGCAATTCCCTTCTGCTCCAT
TCTCGCTTCAAACCACCGTGCTCCATCCCTTCCTCTTCGTCTGTTTATCTGATTTCTCCCTGCTTCACAACCTCTGCGCACATCTC
ATTTCCTCGAGCAGTCGTTATCAAAAGGAGTGACGTGTTTCGTTCTTCCGCTGTAAACAAACGTAGAAGCAATACAGAAGAAGAGG
ATGAGGATGAAGAAGAAGATGATGAAGATTGGAGTGAGTTTGAAGTAGAAGCTGAAGGAGATGAAGACGAAGACGAAGGAGAGTTC
TTGCCGATGGATAAGATGAAGCAATGGCTAGAGAAGAAGCCACGCGGGTTCGGCGCTGGCAAAAAGTACGAGACTTTAATAGAAGA
CAAGCTCCTCGAGGAGATTGAGAAGAGCTGGAAAGCTCAAGCTGCTAATCTCAACAACCTCAAGAACAACGATCCTCTTAAACGCG
ACCATAATAATAATAATAATCTCATCAAAGGTGAAACTCAAAGTGGGTTTCGTGTTCGTGTGACCAATCTTCCTAAGAAGAAGAAT
GTTCACAGAGATCTCAAGGCGGCTTTTAAAGAAGTGAGTGGGGTGTTGAACATAGAACCAGCTGTGTCTGGGAATAAGAAGACTAA
GGATCCTGTCTGTAAAGGGTTCGCTCTTGTTGATTTCAAAACCGGTGTTGATGCTAACAGGTTTGTGGAGCAATTCAATGGACAGA
GATTGTCATTTGGGAAGGTTGTGAAGCAGATAAAATGTCAGGTTGTGGAGTTTGCTGCTTCGAACCAATCAGTTTCTGAGGAGCTA
CGCTCGGATACAGTCTTTGAGGAGCTTCCTTTTCCTGGTTTTGAGGCAGTTTCTAGTGTTGATGTTGTTGAAGAAGATGCTTTTGT
GGATTCGTGGGAAGAAGAATCATTGGATGATTCAGTCAAAGATGCAGATGAAACAGAAGTGGAAGAAGAAGAAGATGAACGTATCA
TAGAATCTCCCAAAGTACATACCAATGTAAGGTCTCAGAAACAAGCTGTGAAGCGAGAGACTAGAGAACAGGAGTTAGAGACACCT
CTAGTTTCATTCCAGGCAGTGAATAAACCCGAGGAAGCTGTGGCAGAAGCACGTGTGGATGATGATGAACATGATAGGTCTGATGA
AGAGGAAGAAGTTGACGAAGAGAATCCTGAACCTCTGAAAAGTTCAGTGTCATCATCAGATGAGGAAAGGATTGAGAGAATCCGTA
GGCTGGAGCTGAAGCTTCTAGGTAGAGAAAAACTATTGGGTGGAGGAGCTGGCTCTGATAAACCAGAAGCAAAAACTGGTGGTAGA
GTGGAAGGAGAGAAGAAAAAGGAGAAGAAGAAGAAGAAAAAGATTATTGTGAAAGGGAAGAAGTCCTCAACCATAGAGATTCCTGG
ATCTTCAAAGAGGTTAAAGATGAAGGAGAAGGCTCTGTTAACTGGGGTCTTAGTCAAGTATGCAGCAAAAGCTGCTTCAACCTCAA
ATGATGAATGATCACTAGGAGCAGAGTGAATCTTTTAAGTGTTTAGTCTCATCATGTCTTCTTTTGACGTTTCAATTCATGGGTAT
TGTCCTTAGGAATGCATCACGGATGCGCATGCATGCTCAAGCTAACTTGGGTACAGATCTCTGTGGTTTAGAATCCTTTTGGACCC
TTTTCTCTTGTATGGTTTGTGCTTTATTATAGATATATATTGAAAGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002888760 hypothetical protein ARALYDRAFT_894820 [Arabidopsis lyrata subsp. lyrata]11493e-123
NP_177177 RNA recognition motif-containing protein [Arabidopsis thaliana]9692e-102
AAB61119 F20P5.8 [Arabidopsis thaliana]9692e-102
XP_002531411 conserved hypothetical protein [Ricinus communis]6305e-063
XP_002311586 predicted protein [Populus trichocarpa]5652e-055

Swiss-Prot top hits (Blast detail)Scoree value
O94317 Uncharacterized serine-rich protein C215.131893e-013
Q8TFG9 Uncharacterized serine/threonine-rich protein PB15E9.01c1858e-013
O15417 Trinucleotide repeat-containing gene 18 protein1525e-009
Q12140 Bypass of stop codon protein 11491e-008
P87498 Vitellogenin-11453e-008

TrEMBL top hits (Blast detail)Scoree value
O04526 F20P5.89692e-102
Q84JK1 Putative uncharacterized protein At1g702009692e-102
B9SZJ2 Putative uncharacterized protein (Fragment)6303e-063
B9HJS2 Predicted protein5651e-055
Q0E1L9 Os02g0326200 protein3581e-031

Arabidopsis top hits (Blast detail)Scoree value
AT1G70200.1 RNA recognition motif (RRM)-containing protein15486e-172

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
76  100%

Unigene MembersMember information