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Information for unigene UN26249

FASTA Sequence
Unigene ID: UN26249Length: 1286  SNP
GGAAGCGCCTCAACCTCACCGCCTTCTTGAGCTACCTCATCCCGTCGAGCTAATCTTCTCTCTCAGAAGCGTGAGTAATGAGGAAG
CTCAAGTACCATGAGAAGAAGGTTCTGAAGAAAGTTAATTTCCTGGAATGGAAAAGAGAACGTGGTCATCTCGAAAACCTCATCAC
GGGTCGTTACCACATGGGTGGTCGTGACGACTACAAAAAATATTCAGGATTGAGTAGGATGGTTCAGAAGCTGACGAATGTATTGA
AACAGATGGATGCAACTGATCCTTTTCGTATTCAGATGACTGATAACCTTCTCGAGAAGCTATACAACATGGGCGTTATACCAACT
AGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCTCCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTA
CGCAGAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGACACATTCGTGTAGGACCAGACACTATCACTGATCCAGCCTTCT
TAGTAACTCGGAACATGGAAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTTCAGTACAATGACAAGTTG
GATGATTACGACATGATGCTTGCTTAACTCTCTCTATTTGTCTTGCTTCTCAAAAGTGTAAACCTTTTTTCTCTATTGCCAAACTA
TATGTTTTCATTACTTATCAAACCTTTTGCAACAGATTTAAGACCAAAGCTTATATTAGGACTAAAAAAAAAAACAAGAATTCAAT
CAAAAGTACTTTGACATCTGAATCCCTTTATTAACCAACCCACATTTCTCATAGAACACTTTCTTCTCCACGCTACAATCAAGAAT
CACCTTGTAGCAACCCATGTCTCGACAATGATCCGATAGAAACTCAACCACTTGCTTCCCGAGACGTTTCCCGCGAAACTCCGAGT
CCACGACGACGTCCTCGATGTGCCCAACTTTGCCGCAGTTTCTCAAAAACTTCTTCTCTATCATCACGCTCCCCGTCGCCGCGATT
CTCCGGGAAGACTCGTCTTCGATCACGCAGATCAGATGGTCGTCTCCGCGGGAGCTGATCTCCTCGAAACGCTGATCGAATTCATC
GTCGGTTACTGATCCGGTGACGGTGAGTTGACCGAGAAGCTCCATGTATCCCTTTCTCCTGTCGGTGATCTCCAGTCTTCGGATCT
TGAGTGTCTGTTTCTCTCCGCTGTTGTCGGAATTAGACGCGTCCGCCATTGGAGGTCGAAGAGCAAGAAGAACTGAGTTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871682 RNA-binding S4 domain-containing protein [Arabidopsis lyrata subsp. lyrata]8463e-088
ABD96845 hypothetical protein [Cleome spinosa]8364e-087
NP_568321 S4/Hsp/ tRNA synthetase RNA-binding domain-containing protein [Arabidopsis thaliana]8355e-087
AAM63516 ribosomal protein-like [Arabidopsis thaliana]8321e-086
ACU19216 unknown [Glycine max]8141e-084

Swiss-Prot top hits (Blast detail)Scoree value
Q921Y2 U3 small nucleolar ribonucleoprotein protein IMP35422e-054
Q3T0M3 U3 small nucleolar ribonucleoprotein protein IMP35351e-053
Q9NV31 U3 small nucleolar ribonucleoprotein protein IMP35332e-053
P32899 U3 small nucleolar ribonucleoprotein protein IMP35063e-050
O13835 U3 small nucleolar ribonucleoprotein protein imp34813e-047

TrEMBL top hits (Blast detail)Scoree value
Q1KUZ1 Putative uncharacterized protein8363e-087
Q683D4 At5g157508354e-087
Q8LCM3 Ribosomal protein-like8328e-087
C6TBL4 Putative uncharacterized protein8141e-084
B9SIX4 U3 small nucleolar ribonucleoprotein protein IMP3, putative7711e-079

Arabidopsis top hits (Blast detail)Scoree value
AT5G15750.1 RNA-binding S4 domain-containing protein8352e-089
AT5G15770.1 AtGNA1 (Arabidopsis thaliana glucose-6-phosphate acetyltransferase 1); N-acetyltransferase/ glucosamine 6-phosphate N-acetyltransferase6425e-067
AT5G39850.1 40S ribosomal protein S9 (RPS9C)1192e-006
AT5G15200.1 40S ribosomal protein S9 (RPS9B)1156e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
610  40%
 
96  24%
 
119  36%

Unigene MembersMember information