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Information for unigene UN26252
| FASTA Sequence |
| Unigene ID: UN26252 | Length: 1078 |
| SNP | GCGACGTGTCTGCCATGGCGATCATGGCCGTAGCCGCGCTCTTTCACGCGAGCAGATTCCCTCTTATCGCCCGTCGAACTTTCCCG
TCTTCTGTTAGTTACTGTCCCCTGACTCTTCTTTCCAATGGATTCACCTACCGACTACAATCGATCATCTGTTTTTCATCGTCCGA
CGGTGGCGGCGTTAGCGAATCCGATATGGTCGTTACAGAAGCTCAGGGTCCCAATTTTCTGAAGTACAGCGACGAAGAGTTGATGA
AGCAATGCAAATTCGAGACCTTTAGAGTTTCAGGTCCAGGAGGACAGCACCGCAACAAACGTGACTCCGCCGTTAGGCTTAAACAC
CTCCCCACCGGGATCGTGTCTCAGGCCGTCGAGGACCGTTCCCAGCACAAGAACCGAGCTTCCGCTCTTAACCGCCTTCGCACTCT
CCTCGCTATCAAAGTGAGGAACAAGGTGGACATTGAAGGCTATTCTCCTCCTCCAGAGCTTCTTCAGATTCTGCCTCCCAAGTCCA
CCGTTAGATCTTCTTCTTCTGGTTCTCAGATTGGTCCCAACAATCCTAAATTTGTACCTGGGATGCAAGCTTTGCTTGACGTTATT
TCTGCTTCTGACGGTTCTATCGCTGATTCTGCCAAGTTGCTGGGCTTGAGCACTGGTGGTTTGTCTCGTTTGATACTCTCTCATGA
TGGTCTTCGTATGGCAGTCAATAGCATGAGGGCAGCCAAGGGAATGAAGCCTCTCAAGTAGTTGGGATGTATAGACATTTGAAGAA
TGATGGTGGGACCTTTGACCAGTCTCTACCATTTTACGCACCTTATTTTGTATACAAAACAAAAGTACAAATGTTGAGTTCAGTCT
AGCATTTGTTCGTCTATTATCATTCAGATCGTCACGTATTTTGAGATGATATATTATTATATAGGCTGCTAAAATATTTATGGTTA
TTTTGAGTCGCCTTTTGTTGTGATTGTGTTGGAACTTTGAAGCTAATACAGTTGGAACCATTTTGGATTAGATTTCTTCCTATTAT
GTTTGTTATTATTTTCTCTCCATTTAGTGAAATCAATCTCGTTTGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002893764 hypothetical protein ARALYDRAFT_473511 [Arabidopsis lyrata subsp. lyrata] | 862 | 3e-090 |
| NP_174601 Class I peptide chain release factor [Arabidopsis thaliana] | 855 | 2e-089 |
| AAG51209 peptide chain release factor, putative; 8726-9996 [Arabidopsis thaliana] | 829 | 2e-086 |
| CBI16955 unnamed protein product [Vitis vinifera] | 666 | 2e-067 |
| XP_002458885 hypothetical protein SORBIDRAFT_03g042170 [Sorghum bicolor] | 650 | 1e-065 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| A7ZE19 Peptide chain release factor 2 | 184 | 6e-013 |
| A6Q582 Peptide chain release factor 2 | 184 | 6e-013 |
| Q21FM3 Peptide chain release factor 1 | 183 | 7e-013 |
| B6J625 Peptide chain release factor 1 | 181 | 1e-012 |
| B6J390 Peptide chain release factor 1 | 181 | 1e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C875 Putative peptide chain release factor | 855 | 1e-089 |
| Q9C815 Peptide chain release factor, putative; 8726-9996 | 829 | 1e-086 |
| C5XEP3 Putative uncharacterized protein Sb03g042170 | 650 | 8e-066 |
| B9N1R9 Predicted protein | 625 | 6e-063 |
| A2WXR4 Putative uncharacterized protein | 621 | 2e-062 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G33330.1 peptide chain release factor, putative | 968 | 6e-105 |
| AT1G56350.1 peptide chain release factor, putative | 151 | 3e-010 |
| AT2G47020.1 peptide chain release factor, putative | 141 | 5e-009 |
| AT2G47020.2 peptide chain release factor, putative | 121 | 1e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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