 |
Information for unigene UN26273
| FASTA Sequence |
| Unigene ID: UN26273 | Length: 599 |
SSR | | GGAAAGAAGAAAGAAGAGGAGAGAGAGAGAAAATGGGAGGTGTATTATCATCTGTGTTAGGAGGTGGTGGAGAAGAAGCAGTCGCA
GGGAATGAATCCGAAAGTCGCGTCATGAAGTTTAGCTCATCGGCTCGGTGGCAGCTTCACTTCAACGAGATCAAAGAATCCTCCAA
ACTGCTGGTGGTTGACTTCTCAGCATCCTGGTGTGGACCTTGTAGGATGATCGAGCCTGCGTTCATCGCCATGTCTGCCAAGTTCA
CTGATGTTGAATTCGTCAAATTGGATGTCGATGAACTTCCCGATGTGGCTAAAGAGTTCAACGTGACGGGGATGCCAACTTTTGTG
CTGGTGAAAAATGGTAAAGAGATTGAAAGGATCGTTGGAGCAAGGAAAGATGAACTTGAGAAGAAAGTTCTCAAACACAGGGCATA
GTGAACCATTAAGTTAACATACCTTCACCAGATATAGCCATTGTGTAAAACTTATTACTATTAATAATTGGCTTTGTTGATCCCTC
TTTCTCCCTTCTGTGTGATTGATTGAAACGGTTTGCTGAAAATGTTTTTTTCGACTCTGCTCTATCATAATCAAGTTTATGCA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABX10749 thioredoxin [Brassica juncea] | 650 | 4e-066 |
| AAN76509 thioredoxin h [Brassica rapa subsp. campestris] | 641 | 4e-065 |
| NP_198811 thioredoxin H2 [Arabidopsis thaliana] | 542 | 1e-053 |
| XP_002868686 hypothetical protein ARALYDRAFT_493991 [Arabidopsis lyrata subsp. lyrata] | 542 | 1e-053 |
| AAM66084 thioredoxin [Arabidopsis thaliana] | 540 | 2e-053 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q38879 Thioredoxin H2 | 542 | 6e-055 |
| Q851R5 Thioredoxin H2-2 | 320 | 4e-029 |
| Q6Z4I3 Thioredoxin H2-1 | 317 | 8e-029 |
| Q96419 Thioredoxin H-type | 301 | 6e-027 |
| O65049 Thioredoxin H-type | 297 | 2e-026 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G39950.1 ATTRX2 (THIOREDOXIN 2); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 543 | 5e-056 |
| AT1G45145.1 ATTRX5; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 293 | 5e-027 |
| AT1G19730.1 ATTRX4; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 281 | 1e-025 |
| AT1G69880.1 ATH8 (thioredoxin H-type 8) | 281 | 1e-025 |
| AT1G59730.1 ATH7 (thioredoxin H-type 7) | 275 | 6e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
