Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN26279

FASTA Sequence
Unigene ID: UN26279Length: 1513 SSR 
AGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCTA
TACCCGGCCGTCGGGGCAAGAGCCAGGCCTCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTAGGGCGCGAGCCCGGGCGG
AGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGA
ACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGTCGGGGGAAACCCGTCTGATAGCGCTTATGCGCGAACTTCGAAAGGGGATC
CGGTTAAAATTCCGGAACCGGGACGTGGCGGTTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGAATTCCGGAAAGAGTTA
TCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGT
GGTGTCCGGTGCATTCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCGCTCACGCCCGGTCGTACTCATAACCGCATCAGGT
CTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGATTG
GCTCTGAGGGCTGGGCTCGGGGGTCCCAGTTCCGAACCCGTCGGCTGTTGGCGAACTGCTCGAGCTGCTAACGTGGCGAGAGCGGA
TCGTCACGTGCCGGCCGGGGGACGGACTGGGAACGGCTCTTTCGGGAGCTTTCCCCGGGCGTCGAACAGCCAACTCAGAACTGGTA
CGGACAAGGGGAATCCGACTGTTTAATTAAAACCTCTCTCTCGTCGGAGTTTTTCATTTTCACCCTGCAGAGCTCGCGATCTTATT
TGAACTCCTCGGATCTTAAGAGAGAGAGAGAGAGAGAGATGGCGTCGAGAAACTCCGTAGCCGGATTCGCGTTATTCACATTTGTA
TTCGCCGTCATCTCGTCTCTCGCCGGCGCTCAAACCCTAGCTCCCGCTCCAGCTCCCACCAGTGACGGGACATCGATAGACCAAGG
GATTGCGTATTTGCTAATGGTGGTGGCCCTTGTCCTCACTTACCTTATCCATCCTCTCGATGCTTCTTCTTCCCTCTCCTTCTTCT
GATTTTTCTTTTTTTTTTATCCTTCTAGTAGTTTGTGGATAACATTCTCTTAAAAAGAGTGAGTCTCTCAAGGCTATTTAATTTGC
TCATGATCTGTGCTTCTGTCATGATTATGATGATGATTCCTGGAGATTGAATCTTTCTCTATTGTTTTCCATCAATCATATTGTTT
GTTTGTTCATCCTCTTTTATTATTTAATTTATTCTTAGTTCATATATACATGTGTTGTTTATAGAAGAAGAAGCCTCAAAATGACA
AGAGGGGATTATGTCAATTTAAAAAAAATCCGACCATTGTGTTAGAAGGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_003064993 predicted protein [Micromonas pusilla CCMP1545]7326e-075
BAA10929 cytochrome P450 like_TBP [Nicotiana tabacum]4522e-042
T02955 probable cytochrome P450 monooxygenase - maize (fragment)4512e-042
XP_002450730 hypothetical protein SORBIDRAFT_05g016465 [Sorghum bicolor]4182e-038
XP_002489102 hypothetical protein SORBIDRAFT_0070s002020 [Sorghum bicolor]4011e-036

Swiss-Prot top hits (Blast detail)Scoree value
O82337 Arabinogalactan peptide 163291e-029
Q9M373 Arabinogalactan peptide 202969e-026
Q9FK16 Arabinogalactan peptide 221651e-010

TrEMBL top hits (Blast detail)Scoree value
C1NAN1 Predicted protein (Fragment)7324e-075
O04892 Cytochrome P450 like_TBP4521e-042
C5Y2D0 Putative uncharacterized protein Sb05g016465 (Fragment)4181e-038
C6JS61 Putative uncharacterized protein Sb0070s002020 (Fragment)4011e-036
C6JSJ8 Putative uncharacterized protein Sb1138s0020303911e-035

Arabidopsis top hits (Blast detail)Scoree value
AT2G46330.1 AGP16 (ARABINOGALACTAN PROTEIN 16)3309e-031
AT3G61640.1 AGP202976e-027
AT5G24105.1 AGP41 (ARABINOGALACTAN-PROTEIN 41)1856e-014
AT2G46330.2 AGP16 (ARABINOGALACTAN PROTEIN 16)1712e-012
AT5G53250.1 AGP22 (ARABINOGALACTAN PROTEIN 22)1651e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
197  64%
 
182  18%
 
201  9%
 
61  9%

Unigene MembersMember information