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Information for unigene UN26313

FASTA Sequence
Unigene ID: UN26313Length: 699 SSR 
GGACTCAGAAACAAAAGCACTTTAATGCAAGACTCCAATAAAGCTACAAAATAAAAGTAGTCTTCAATTTTAGAAACCTCAGAAAA
GAAAACAATGAGATGTTTCAGATCAAATGCTCCAAGAACTGAACCACCACCACCACCACCTTCATACGGACAACAAGGCGTCATTT
ATCAACAACAAACGGTAAGAGAAGAAGTGCTACTACAGATTCAGGGATGCAGAGCCCATCTCATCGACGGATCCGAAGCGATAGAG
CTCGCCGCCGGAGATTTCGAGCTCGTACAGGTCTCAGACAACGGCGTAGCTCTAGCTATGGTCGTGAGGATCGGGAACGACCAACT
ACAGTGGCCGGTCATTAAAGACGAGCCAGTGGTGAAACTCGACGCTCGTGACTACCTCTTCACGCTTCCGGTGAAAGACGGAGACC
CGCTCAGCTACGGCGTCACGTTCTTCCCTAGAGACCCGAACGACGTCGTTTTCGTGAACAGTCTCGAGTTGCTAGACGATTTCTTG
AGAGAGAACTCGTGTTTCTCTTCGTCTAAGTCTCCTGTTAAAAATGGAATCGACTGGAAAGAGTTTGCCCAGGATTGAAGATTATG
ACAATGTCGTGGCTAAAGCCATCGCTGGAGGGACAGGGCATATCATTAGAGGGATGTTCAAATGCAGTAATGCTTACACTAATCAG
TTAACAAAGAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870237 predicted protein [Arabidopsis lyrata subsp. lyrata]6183e-062
NP_193280 Senescence/dehydration-associated protein-like protein [Arabidopsis thaliana]5654e-056
CAB45990 hypothetical protein [Arabidopsis thaliana]5654e-056
XP_002885452 hypothetical protein ARALYDRAFT_318900 [Arabidopsis lyrata subsp. lyrata]5091e-049
NP_188797 Senescence/dehydration-associated protein-like protein [Arabidopsis thaliana]5063e-049

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O23397 Putative uncharacterized protein AT4g154505653e-056
Q8GY71 At4g154505653e-056
Q3EB29 Putative uncharacterized protein At3g21600.25062e-049
Q9LVE6 Similarity to senescence-associated protein5062e-049
B9RKG9 Putative uncharacterized protein3637e-033

Arabidopsis top hits (Blast detail)Scoree value
AT4G15450.1 CONTAINS InterPro DOMAIN/s: Senescence-associated (InterPro:IPR009686); BEST Arabidopsis thaliana protein match is: senescence/dehydration-associated protein-related (TAIR:AT3G21600.1); Has 81 Blast hits to 81 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).5652e-058
AT3G21600.1 senescence/dehydration-associated protein-related5061e-051
AT3G21600.2 senescence/dehydration-associated protein-related5061e-051
AT4G35985.1 senescence/dehydration-associated protein-related1942e-015
AT2G17840.1 ERD7 (EARLY-RESPONSIVE TO DEHYDRATION 7)1654e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  50%
 
101  50%

Unigene MembersMember information