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Information for unigene UN26324

FASTA Sequence
Unigene ID: UN26324Length: 1508 SSR 
ACTGAAAAATTCAAATTTGATTTGTAGTTTGGTTGAAAGTAGCATAATCTTAATGCAAAACTAGTTTGCAATTAAGACAAAAACAA
AAGATTGAAAAAGAGATTACATGATCCATGGTTACTCCGTCAGGAAAAGGAAAAAGATATTACATTTAGATATTGCCTAAAAATGC
AAGAAGCAAAAGCACATGAAGACCTCAAACAGTGAGGGCTGAGAGAGTTTCTCCATTCATATCTATATGAACTTTATCTTCATTCA
AGCTTGACTCTTACGACGCTGCCTCAATCTTCCACCAATACTGTCCGGGTTTGGCTCAACAGACATTTTCCTCTTGCCTCCTCTTG
TTTTCCCATTCTCTTTGTCTCCAGAATAAGCCTTAACATCAATCATCAACAAAGGAGTTGCTGGATCCATCTCGTTCACTGAAGTT
TGATTGTCCTCGGCAGACGAGAAGAAACTCAATGACTTTCTAGCTGAATCCTGATTCTTGTCTGTGCCTTCATTATCATCGTCAAT
GTGATTCTCCTGAACCGCAAGCCCATCGGTGATCTGGAGGAGATTGAGATCATCATCATCTTCTTCTGAAGACACCTTAGCTTCTT
TGAAAGAAAGTGACCTCTTTGCAGAAGCTTGGGAAGGAGTGTCGTCTGTCTCATCATCATCCTCATCTGTTTCTGACTGCTTGTTG
TTTTGAATCAGGTAATGTGCAACAGACTTGTACCCTAGCTTACATACCTTCTTGTAAGCTGTACCAGTGGGCAACCACCCTTTACG
TTTACGACAGAGACTGCAGTTGCAGATTCCGCGACAGCCAGGACAAATCCACTCCGGATTCTCCAGTGTCTCAAGCACATGTTCTC
CATACCTCATGTACAAACAATCTCCACAGAATTGACCTGTGACAGATGGGTGACACTTGCTGCATTGTGTTCGATAACCAAGCGTC
TTCTGCCTGCATTGGCGGCAAGTCTTTCCTCTAACAGGATCATAAATCCGTTTCCCATCTGCGGCGTAACCATCGACAAAAAGCTC
CCAGGTCCGCTCTGTGTTACCCAGCAGCTTCTCATGCTCATCAGTGTAAATCTCAGGCCTTTCGCCTCCTTCTCCGATCCACAGAA
CCACCTCTTTAGATGCTATACCCTTCTTCTCTTCCGCTTCCTCGAAGTATGTCACTGGCGATACGTTCTTCAACCTTGAGGATCGT
CTGGTGGAGACGGAGAGCTGAAGAGGAGGAGGAGGAGGGGTGTTTCGAGCGGAGGATCTAAGATCTGGATTCGAATCAGCAGCTTT
GGTGTAGCGCCTTTTAGCGGGTCGGATCCCGGATTTGAGCTTGAGGGAGAGATCCACGATGCCGAGATTCTGCATCCGCTGGAGAT
TCTCCTTGATCCTCTCTTGTCTGCATTTCTCGTAGATCGATACGTTTGAGGTTGGATCAGGAGGGTTCGTGACGACCGGTACTGTA
GATTTCGCCCTCGTGCTCATCGCAGGCATTGTGAGTTGATTTCCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869009 hypothetical protein ARALYDRAFT_490927 [Arabidopsis lyrata subsp. lyrata]13715e-149
NP_195428 Zinc-finger domain of monoamine-oxidase A repressor R1 [Arabidopsis thaliana]11458e-123
CAB16784 putative protein [Arabidopsis thaliana]9558e-101
NP_179934 Zinc-finger domain of monoamine-oxidase A repressor R1 [Arabidopsis thaliana]9217e-097
XP_002880511 hypothetical protein ARALYDRAFT_320173 [Arabidopsis lyrata subsp. lyrata]9101e-095

Swiss-Prot top hits (Blast detail)Scoree value
Q96GN5 Cell division cycle-associated 7-like protein2771e-023
Q922M5 Cell division cycle-associated 7-like protein2717e-023
Q4G059 Cell division cycle-associated 7-like protein2691e-022
Q32PH1 Cell division cycle-associated protein 72493e-020
Q9BWT1 Cell division cycle-associated protein 72483e-020

TrEMBL top hits (Blast detail)Scoree value
Q0WPT6 Putative uncharacterized protein At4g3711011455e-123
O23175 Putative uncharacterized protein AT4g371109556e-101
Q1PF11 Putative uncharacterized protein9215e-097
B8BL43 Putative uncharacterized protein7172e-073
Q2R2F0 AT hook motif family protein, expressed7163e-073

Arabidopsis top hits (Blast detail)Scoree value
AT4G37110.1 protein binding / zinc ion binding11435e-125
AT2G23530.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: protein binding / zinc ion binding (TAIR:AT4G37110.1); Has 305 Blast hits to 301 proteins in 74 species: Archae - 0; Bacteria - 2; Metazoa - 117; Fungi - 39; Plants - 120; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).9356e-101
AT1G67780.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, flower, root, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: DDT superfamily (InterPro:IPR018501), DDT subgroup (InterPro:IPR018500), Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67270.1); Has 280 Blast hits to 277 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 47; Plants - 92; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).2573e-022
AT1G67270.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DDT superfamily (InterPro:IPR018501), DDT subgroup (InterPro:IPR018500), Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67780.1); Has 297 Blast hits to 296 proteins in 63 species: Archae - 0; Bacteria - 2; Metazoa - 128; Fungi - 30; Plants - 98; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).2448e-021
AT5G38690.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT superfamily (InterPro:IPR018501), DDT subgroup (InterPro:IPR018500), Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67780.1); Has 492 Blast hits to 468 proteins in 97 species: Archae - 9; Bacteria - 41; Metazoa - 179; Fungi - 19; Plants - 99; Viruses - 2; Other Eukaryotes - 143 (source: NCBI BLink).2142e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  40%
 
93  60%

Unigene MembersMember information