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Information for unigene UN26337
| FASTA Sequence |
| Unigene ID: UN26337 | Length: 1637 |
SSR | | GGACTGTTTTCCCGGAAAATCCGCCAAGGAAAAGCTAACAACAACAACAACGAACCTAAGGAGAAAAATCGTTTCCTTTCACTCCA
CGAGTTTCCACCTCTCTTTCGTAACCTCTCAGCGTCTCTTCCTCGTTTTCTCTCTTCTTTTTTTCTCTCCTCGAAAAAATCTCAAC
ACATCTTAGAATAGGGGTTGTGTGGTGGTGGTAAGATAGATTGATATAGAGCGGCAATCAAATGCTAACGGATCGAGGGAGGCGAG
TTTCTATCTGTATTGGGACTCTTGACTATGGCCACCGAAAATTCCGTGGTAATGGTTGTTACGGAGGTTTCGTTGACCGATCGTCG
GAGGGATGCCGCGAATGGAGTCCTTCATCAGCTTCGAGAATTCTCCGTATCTCCTCTCCCACCACGTCTCCACCGTCGGCGACTTC
TCCCGTCTCCCTGAATTGCTCCTACTCTAACAACGGCTCCGCTGGCGGCTATATCGAGCATCGTGTCTCCAAGTTCGACACTCTCG
CCGGCATTGCCATCAAGTACGGTGTTGAGGTAGCAGATATTACGAAGCTAAATGGACTTATAACTGACCTTCAAATGTTTGCTCTC
AAGTCTCTCCGGATTCCATTACCTGGGAGGCATCCTCCTTCTCCCTGCTTATCTAACTCCTCCTTCACCCATGGAGGGGATTGTTC
TGAGCCAGCTTCATCATCACCAAGCAATGGCAACCTCCAAGATGTGTTTGACCCCTTCCAGTCTCTGAGGGAGACGAAGAAGATCT
CTCCAGCCATGGACTCCCTGCAAGGTTACTACGGTCTGAAACCAACAAGCAGGAGAGCTTCTGAAGCTTCTCATCTCCAAGACAAT
GATCAGTACCTCAAACCGTTCCCAGCCACCAGTACTCCTTTAAACCAACACAGAAAATCCAGAAGCTTGGTTGATGCAGTTATCGC
CGAGGTCAACAAATCATCATCCAACGGGTACAACAAGGAAGTGAATTCTGCTGATAAGCCAATCAGAAGACGCCAAAAATCTGAAG
CTGATTTCAGTTCGAGGACCCCAGAACTGCTTCTGAAGAAGGAGAGCAGAAGCAGCAGTGGCGTGTTTTCTGCAATAGCCGGGAAA
GGTTTAGCACTTAGACCCAAAGCAGCAGCGAGCAGAACTAACTCGCCAGCAGATACTAATGGTAATTCCAAACCAGTACCAGTCAA
TCTGATGGATGCTCCTTTGGGAGACAGCTTCTCAAGCGTGAGGAAATCGTTTAGCGCCTCTATTCTGCAAGAACCGGTCAACAAGG
GTGGTTCATCATCATCATCGCTATGGACACTGAAAGCAGATTTGCTCCAACAAGCAGCCATGGCAAGGTCTATCTTTGACGGATTG
CCTAAGCCTCTAACTGGTCGGAGAAACAAAAAGGCTATGTAGCTTCTTCATCTCTTAAACTTTATTGACTGTCGACTGTGTCCCAA
AAAGCAAGAGAAGCTAGTAGGTAAAATTACAAGTAGAGTGTACATTGCACTGCATTGCATTTAATTTAAAAACAATAATGCAACTT
GTGTTGTGACTTGTGAGTGAGTGTTATGTTAGATCGGGCACACTAAATGTATTTTTGTGTATGTTTGAAATAAAAAAAGTTGCAAT
GAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197704 Peptidoglycan-binding LysM domain-containing protein [Arabidopsis thaliana] | 1237 | 2e-133 |
| BAB09830 unnamed protein product [Arabidopsis thaliana] | 1227 | 3e-132 |
| XP_002872038 hypothetical protein ARALYDRAFT_489170 [Arabidopsis lyrata subsp. lyrata] | 1219 | 2e-131 |
| XP_002307170 predicted protein [Populus trichocarpa] | 674 | 3e-068 |
| XP_002520920 conserved hypothetical protein [Ricinus communis] | 670 | 1e-067 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VYP8 Putative uncharacterized protein At5g23130 | 1237 | 1e-133 |
| Q9FN43 Genomic DNA, chromosome 5, P1 clone:MYJ24 | 1227 | 2e-132 |
| B9H5S3 Predicted protein | 674 | 2e-068 |
| B9S4K1 Putative uncharacterized protein | 670 | 7e-068 |
| Q8L708 At5g08200 | 553 | 3e-054 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G23130.1 peptidoglycan-binding LysM domain-containing protein | 1278 | 1e-140 |
| AT5G08200.1 peptidoglycan-binding LysM domain-containing protein | 553 | 1e-056 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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