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Information for unigene UN26359
| FASTA Sequence |
| Unigene ID: UN26359 | Length: 1013 |
SSR | | GGATCTGTCTTCTTCCTCCTCTGTTCTCTATCTCTCTCTCTCCGCGCTTGAGGTAAGGCGTCGGAGATTACCAAAAAAAAAATATC
TCGAATCCTCTCCGTTATGGCTACATCAGGTGGAAGTCCTCCTAAGCCTTGGGAACAAGAAGGGAACAACAACGCATCTGCTGGGC
CTAAGCCTTTCAGGCCTCCTTCCAATACCAGCACTGCTGATTCCGTTGAGGCTTCTGGCATGGCGAATCCTGGTGAGCTGGTTTCG
TCTGTTAACAGGACTAACACAGCTGCTGGTACAATGAATGGACTGAGTAGGCCTGTGCCGAGTAGGCCTTGGGACCAGCAACAAAC
CTATGGAAGCACTTATGGTGGTGGTTATGGTTCAAACCTAGGTATGACCTCTGGGTATGGGTCTGGTACATATGGTTCAGGACTAG
GTGGGTATGGTTCGTCATATGGGGGTGGAATGTATGGTGGTAGCAGCATGTATAATAGAGGAGGTTGTGGCGGTGGTGGTCTCTAT
GGGAGTTCAGGTATGTATGGTGGTGGTGGTGGGATGTACGGCAGTAGTTTTGGTGGGGGTTATGGTATGGGTATGGGGACAGGGAT
GGGTATGGGTATGGGGATGGGAATGGGGATGAGTCCTTATGGTGGTCAAGATCCAAATGATCCTGCACCAGGTGGTGGCGGTGGTG
GTTGGGATAATGTATGGGGTAACTAAGTTGCTTCGTTTCTTTAAGCCAAGTCCTTCAACGTTGCTCTGAATACACAAATGGTAATC
AGTTTGGATATGAGTAGATTGTGCAGCGGCCTCCTAAGCAGATTGGGTTGTTGTTGTACTAAAGCCTGATGTTTGTTTACAAATCG
AGTCTCTTCTTCCTCAGTGTTCTGGTTATTTGATAAAACAAGTTGCAGATATTTATGTCGAACTCAATAAAATGGTAAGTTAAGTT
GTAAAAGAGTTTCTAAAAGACATATCTGTTGTGTATTCATTTAATATTATTGGATTCTCTTCTTCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187412 peroxin 13 [Arabidopsis thaliana] | 752 | 2e-077 |
| XP_002884657 hypothetical protein ARALYDRAFT_478079 [Arabidopsis lyrata subsp. lyrata] | 747 | 6e-077 |
| BAH56952 AT3G07560 [Arabidopsis thaliana] | 539 | 8e-053 |
| AAP54039 transposon protein, putative, CACTA, En/Spm sub-class, expressed [Oryza sativa Japonica Group] | 239 | 5e-018 |
| EAZ16269 hypothetical protein OsJ_31729 [Oryza sativa Japonica Group] | 238 | 6e-018 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O70133 ATP-dependent RNA helicase A | 229 | 3e-018 |
| P09789 Glycine-rich cell wall structural protein 1 | 216 | 1e-016 |
| P10495 Glycine-rich cell wall structural protein 1.0 | 213 | 2e-016 |
| P10496 Glycine-rich cell wall structural protein 1.8 | 210 | 5e-016 |
| P18165 Loricrin | 207 | 1e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SRR0 AT3g07560/F21O3_27 | 752 | 1e-077 |
| C0Z2M3 AT3G07560 protein | 539 | 5e-053 |
| Q7XDV2 Transposon protein, putative, CACTA, En/Spm sub-class, expressed | 239 | 3e-018 |
| A3C5A6 Putative uncharacterized protein | 238 | 4e-018 |
| B9SFQ6 Glycine-rich cell wall structural protein 1, putative | 228 | 6e-017 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G07560.1 PEX13 (PEROXIN 13); protein binding | 752 | 6e-080 |
| AT5G46730.1 glycine-rich protein | 223 | 1e-018 |
| AT2G36120.1 DOT1 (DEFECTIVELY ORGANIZED TRIBUTARIES 1) | 221 | 2e-018 |
| AT1G74230.1 GR-RBP5 (glycine-rich RNA-binding protein 5); ATP binding / RNA binding | 205 | 2e-016 |
| AT2G32690.1 GRP23 (GLYCINE-RICH PROTEIN 23) | 205 | 2e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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