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Information for unigene UN26367

FASTA Sequence
Unigene ID: UN26367Length: 1046 SSR 
GCACTGTTCCAGAAACGAGCTGCGATGCGTCAGAGCTCAAGCAGCAAAACGTGCAACTCGGAGTCTTCCTCCGAGATAAGAAGATC
AAGCTACGAGCGTGAGAATCTCGACGACGCGAGCACTGGAATCACAGACATCATCTCCGATGAGCATAACAACAACAACAACAAAG
GCAAGAAAAAAGGAATGCCTGCTAAGAATCTAATGGCTGAGAGAAGAAGAAGGAAGAAGCTTAACGATAGACTCTACATGCTCAGA
TCAGTAGTCCCCAAGATCAGTAAAATGGATAGAGCATCTATACTTGGTGATGCTATTGATTATCTTAAAGAGCTTTTACAGAGAAT
CAATGATCTTCATACCGAACTTGAATCTACTTCTCCACCGAGTTCTTCAAGCTTGCATCCGTTAACACCGACCACGCAAACGCTGA
GTTACCGTGTTAAGGAAGAGTTGTGTCCTTCTTCTTCTTCCTTTCCAAGCCCTAAAGACCAGCAAGCTAGAATTGAGGTTAAGCTA
AGAGAAGGAAAGGCAGTGAACATCCACATGTTCTGTGGACGACGACCTGGTCTTTTACTTTCCACCATGAGAGCTCTGGATAACTT
AGGATTGGATGTTCAACAAGCTGTAGTTAGCTGCTTCAACGGGTTTGCTTTGGATGTTTTCCGTGCTGAGCAATGCCAAGAAGGCC
ATGATGTGGTGCCTGAACAGATCAAAGCAGTGCTGTTAGACACTGTGGGCTACACCGGTTTGGTTTGAGGAGTCCAGTGAAGAAGT
ATGTGTGTGAAAACAGAGCTACATCTAAAGCCTTTTCTTTAGTTCTGTAGTTTTCTTCTTACTTAGTTTTTCATCAAAGTTTTTTA
ACCATATGTATTTCATATGATAACTGTTTTATCTTTTAGCTTTGAAACAAAACATGTGTTTTGCTTTTTACAACTTTTTATTTAGC
TTTTTTCTGAGAAATGTGTTTTCCAATGCTTTGCTCTTGTACAAGAACACGTAGAACACACATGGAAAAAGAGTAAACAGTGCATC
CACACAAAAGAAAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_172746 uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]11114e-119
XP_002889974 predicted protein [Arabidopsis lyrata subsp. lyrata]10872e-116
ADY68771 inducer of CBF expression 1 protein [Raphanus sativus]9091e-095
AEE00745 inducer of CBF expression [Brassica juncea]8831e-092
ACB70963 ICE1 [Brassica rapa subsp. chinensis]8784e-092

Swiss-Prot top hits (Blast detail)Scoree value
Q9LPW3 Transcription factor SCREAM211156e-121
Q9LSE2 Transcription factor ICE18711e-092
Q9LSL1 Transcription factor bHLH932616e-022
Q9ZVX2 Transcription factor ABORTED MICROSPORES2608e-022
Q9LXA9 Transcription factor bHLH612473e-020

TrEMBL top hits (Blast detail)Scoree value
D2DHG7 ICE-like protein8774e-092
Q6H104 Inducer of CBF expression 1 protein8622e-090
B8XJY5 Inducer of CBF expression 18272e-086
B8XJY8 Inducer of CBF expression 48211e-085
B9RGZ2 Putative uncharacterized protein8183e-085

Arabidopsis top hits (Blast detail)Scoree value
AT1G12860.1 SCRM2 (SCREAM 2); DNA binding / transcription factor11121e-121
AT3G26744.1 ICE1 (INDUCER OF CBF EXPRESSION 1); DNA binding / transcription activator/ transcription factor8728e-094
AT3G26744.2 ICE1 (INDUCER OF CBF EXPRESSION 1); DNA binding / transcription activator/ transcription factor8728e-094
AT3G26744.4 ICE1 (INDUCER OF CBF EXPRESSION 1); DNA binding / transcription activator/ transcription factor8728e-094
AT5G65640.1 bHLH093 (beta HLH protein 93); DNA binding / transcription factor2616e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
85  83%
 
121  17%

Unigene MembersMember information