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Information for unigene UN26390

FASTA Sequence
Unigene ID: UN26390Length: 1289 SSR 
GCTAACAAATAGTCAAATGCTAATTAAAGAGGTTTTTATTGTATACACAAAACTGAGTAGACATTAACATAAGCTTCTTTAGTCAG
AGTCAATCCAAAGGTTCCCTATACACATATATAATCTATACTGAAACAGATAAAGATACCACAAGAGCGAGACCGTTCATGGAACA
GTAGATATCACAACACCTTCAAGTTGCTGAATGATCTCCAACAAGCTAGCAGCTTTCCTCTTTGCTCTATCAGTCCCATTCTCGGT
AAGTTCCTTCAACGCAACATCTGCACCAACCTCTCTCGCTACATTCAACCTCTCCATATTCCCAACACATAGATACCAAAGTATCG
CAACAGCGTTCTCCCTGTTCCTCGGTGACCCTGTCCTTATAATCTCAACCAAAACAGGAATAGTATCTGCTTCACCTATAGCTCCC
TTCCCTTCTTGGTTCGTTGAAAGTATCGCCAGGATAACCAAAGCTTCATCCACCATTCCTCCACCTGCATCTTTCAGTAACCTCGT
CAGAGGATCAACGATACCTCCCTTGATGGCTCTTGATTTGTTCCCTTGGTATATGCACAGATTGAATATAGCCGTTGCAGCGTCTT
TTTTCCCTCTTCTTGTTCCTTCCTCGAGCAAGGTTATAAGGGCCTGGATAGCTCCAGCAGCACCTATCGCCACTTTGTTCTCATCC
ACAACAGATAAGCTGAAAAGAGTCGCAGCTGCGTTCTCTCTAGCCTCCATGCTTCCGTTTTTAAGCACTTCCACTATATCCGTGAT
GGCTCCTGCGTCAACGATGGCTCCTTTGTTACCTTCGTTTATAGAAAGATTCAGAAGCGCTGTAACAGAATGTTCTTGAGTCCGGG
GATCCGGTGAGGACAGAAGCTCTACAAGGCGCGGTATGGCTCCAGCCTCAGCGATGCAGACTCTGTTGTCCGCGTTCCTCTTGGCT
AGTAACCGAAGCTCTCCAGACGCAGCTCTTTGCTGTTCTGTGGTACCGTTGTCTAGTTTCTCTAACAAGGCGAGGACGAATGCTCG
GTCACAATCGGAAGAGCTGCTTCCTCCTCCTCCTCCTGGTCTTGTGGTTCTGTGGCTCCCTTGGTTCTGAGGAAGCTCAATACCGT
TGCTCTCACACCATAGAGCAATGAGACTCTTTAACACGTAGTTAGGTGTTAATCCGGAATGCAAGAGCGTCTCCTGAGATTTCGGA
CAGGTTTTGTGACCAGCATCGAGCCACTTCTGTATGGATGATCTCTCATATGTCTGTCCAGTGGAGACGATGACAGGATCTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191045 U-box domain-containing protein 14 [Arabidopsis thaliana]17253e-190
XP_002876275 armadillo/beta-catenin repeat family protein [Arabidopsis lyrata subsp. lyrata]17244e-190
CAB41099 putative protein [Arabidopsis thaliana]16851e-185
XP_002311996 predicted protein [Populus trichocarpa]14135e-154
XP_002270524 PREDICTED: hypothetical protein [Vitis vinifera]13948e-152

Swiss-Prot top hits (Blast detail)Scoree value
Q8VZ40 U-box domain-containing protein 1417251e-191
Q9SNC6 U-box domain-containing protein 1311354e-123
A2ZLU6 Protein spotted leaf 1110809e-117
Q0IMG9 Protein spotted leaf 1110809e-117
Q9ZV31 U-box domain-containing protein 1210333e-111

TrEMBL top hits (Blast detail)Scoree value
B9HLH5 Predicted protein14133e-154
B9HUI8 Predicted protein13713e-149
B7ZXS6 Putative uncharacterized protein12101e-130
B6SXY9 Putative uncharacterized protein12092e-130
C5Z221 Putative uncharacterized protein Sb10g00028012073e-130

Arabidopsis top hits (Blast detail)Scoree value
AT3G54850.1 PUB14; ubiquitin-protein ligase17261e-192
AT3G46510.1 PUB13 (PLANT U-BOX 13); ubiquitin-protein ligase11353e-124
AT2G28830.1 binding / structural constituent of ribosome / ubiquitin-protein ligase10332e-112
AT1G71020.1 armadillo/beta-catenin repeat family protein / U-box domain-containing protein9491e-102
AT1G71020.2 armadillo/beta-catenin repeat family protein / U-box domain-containing protein9491e-102

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  33%
 
94  67%

Unigene MembersMember information