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Information for unigene UN26402
| FASTA Sequence |
| Unigene ID: UN26402 | Length: 850 |
SSR | | CTCTCTCTCTCTAAACAAAACACTCCCATAGAAATATATTGTACAACCGGAAAGGCGGTTTCATTCATCGATTCTCTAGCTTTTCT
GCAGAGAGACAAATCAAGAAAGAAGAGTAGGTGGCCACCATCGATGGATGGAATGTACGGCTTCCAACCAACATGTGACTACTCAG
ATAAGGCGGGGATGATGATGTTACCGGATAATCTGATGTTTCCTTCGGACTACCAAACCTTGCTTTGCTCCTCTGCTGGAGACAAT
CGCGTCTCAGATGTTTTCGGATCCGACGAGTTATTCTCAGTAGCAGCCTCCGGTACTATGTCGTCGGGGGTTGCATCGATGGCCCC
TGGGATCCGAAGAAACGATGGTAACGTATCGCTCGGTGTCATTAAGGCGAAAATCGCTTGTCATCCTGCGTATCCACGGTTACTAC
AGGCTTACATGGATTGTCAGAAGGTCGGAGCGCCGCCGGAGATAGCCTATTTACTGGAGGAGATTCAACGGGAGAGCCATGTGTAC
AAGCAAGGCGTTTCTCCGTCGTCGTCTTACTTCGGAGCTGATCCTGAGCTCGATGAATTCATGGAAACCTATTGCGAAATATTGGT
GAAGTACAAATCGGACCTCGAGAGGCCGTTTGATGAGGCGACGACCTTCTTGAACAAAATCGAGATGCAGCTACGAAACCTATGCA
CTGGCGTGGAGTCTGCCACGGGATTTTCGAGGATGGTGCAGTTTCATCTGACGAGGATTAAGTGGAGCGATGAGATATTACAGATG
GGAAAAAATATGCGAAGACGTGATCTCAAGGACAGTTGCTCGCAATTCGAAGCGGTATAGTCACTAAAGCTGGAGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_850951 homeobox protein knotted-1-like 6 [Arabidopsis thaliana] | 783 | 3e-081 |
| NP_173752 homeobox protein knotted-1-like 6 [Arabidopsis thaliana] | 775 | 3e-080 |
| AAF87007 F26F24.25 [Arabidopsis thaliana] | 766 | 3e-079 |
| AAF79598 F28C11.2 [Arabidopsis thaliana] | 764 | 5e-079 |
| XP_002893283 hypothetical protein ARALYDRAFT_472599 [Arabidopsis lyrata subsp. lyrata] | 764 | 5e-079 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q84JS6 Homeobox protein knotted-1-like 6 | 788 | 4e-083 |
| P46640 Homeobox protein knotted-1-like 2 | 561 | 7e-057 |
| Q9FP29 Homeobox protein knotted-1-like 1 | 327 | 1e-029 |
| A2Y007 Homeobox protein knotted-1-like 10 | 303 | 6e-027 |
| Q7GDL5 Homeobox protein knotted-1-like 10 | 303 | 6e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q20CE8 Fgenesh protein 18 | 492 | 1e-047 |
| B9SHD4 Homeobox protein knotted-1, putative | 480 | 3e-046 |
| Q9SXV4 Homeobox 22 | 440 | 1e-041 |
| B9RAZ8 Homeobox protein knotted-1, putative | 435 | 5e-041 |
| B9HTV9 Predicted protein | 429 | 2e-040 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G23380.1 KNAT6; DNA binding / transcription activator/ transcription factor | 788 | 3e-084 |
| AT1G23380.2 KNAT6; DNA binding / transcription activator/ transcription factor | 775 | 1e-082 |
| AT1G70510.1 KNAT2 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA 2); transcription factor | 573 | 3e-059 |
| AT4G08150.1 KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA); transcription factor | 279 | 3e-025 |
| AT1G62360.1 STM (SHOOT MERISTEMLESS); transcription factor | 269 | 5e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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