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Information for unigene UN26425

FASTA Sequence
Unigene ID: UN26425Length: 1107  SNP
GTTTCTTCTTTTATTTTAAAATTTTGCTATGATTATTTCGTTTCTCAACCTCTCCTCACATATAATAATAATGATAATTTATTTGA
AGAAGAAACAGAGAGATTTAGGAAAGATGTGTATGGGAAGAAGAAGAATCACGAGTCTTAGAGCTGAAACAACAAGCTGATACTTC
TAAAACCCCATTGGGTGTTTGTGAACATAAGCCTGACCCATCACTCTCTATCATTTCCCCAATCTTCTTCACTCTCTCCTTTTGAA
GTAGTGAGAAAAGAGGAGAGAGGGAAGAGTTGTCAAAGTGTACTGTGTACAGTTCTCCAGAAACAGAAAGTGCAACTGCAGCAGCA
ACTTCAGAAGGTCTAAACTCCAAAAAGTCAATACCTTTGGTTTTGCTGGCTATCACTTGTAATGATCTGGATATCAATGTGCTGGA
TGGTTCTTGATCACATTTACTCATCTTCCTCAGGAAATATCTTATGTATGAGCAGGGAGTTATCGCTCTCAATCTCCATTCCAGTC
TGTTCAACACCAAAAGCTCCATTCTTTGAACTGATTTGGCCTCAAACACAAACTGAGGATGTCCAGCCTGAAGATCTATTAGCAAT
GGGACTTCAGTTTCTTCAATTTTGGCTGCCAATGATAAACAAGCCACAGCCAACAACTGCACTGCCCAAGCGTTGCCACTAGGGAC
ATCATGAACTGATAAGAACCGATCCAAGTAGTTCATAGATAAGCAAATACACATTGGTCCAAACTGGTGTTCCTCACAAGCCTTTA
AAATCCAATTAAGAGCTTCTCTTCTTCTGACATTCAAATCAAAATCTCCACTTCTGAGTCTGCTGATGTAATCATCACTTGGCAAA
AGCTGCTTCTCCTTCTCCTTCTCCATCAAAGTTGGTGATCTCTGTACATAAAAGACTCAGTTCTAGATTGTCTGCCATTATAACAG
AGTGTTTCAAAAAAAAAAGTTTTTTAAAAATTGTTCTTCTTTCCGATCTAAATTGTTAAGACAAGGATTGTCATCTGGAGATTGGG
TTTTTGATTTTTCTTAATGTCTTCGTGTAAGGATTTTTTTTTTTGTTTTGTTTTTTTTCTTTTTGCTTTGGTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_201345 cyclin-D4-1 [Arabidopsis thaliana]11706e-126
CAB41347 D-type cyclin [Arabidopsis thaliana]11662e-125
AAM60963 D-type cyclin [Arabidopsis thaliana]11625e-125
XP_002866670 predicted protein [Arabidopsis lyrata subsp. lyrata]11482e-123
NP_001190620 cyclin-D4-1 [Arabidopsis thaliana]10192e-108

Swiss-Prot top hits (Blast detail)Scoree value
Q8LGA1 Cyclin-D4-111703e-127
Q0WQN9 Cyclin-D4-28665e-092
P42752 Cyclin-D2-15512e-055
Q6YXH8 Cyclin-D4-15001e-049
Q4KYM5 Cyclin-D4-24831e-047

TrEMBL top hits (Blast detail)Scoree value
Q9ZRX9 Cyclin D2.1 protein6453e-065
B9SXI2 Cyclin d, putative6203e-062
B9H6X0 Predicted protein6113e-061
A8Y908 D2/4-type cyclin5962e-059
Q8L6U0 Cyclin D25818e-058

Arabidopsis top hits (Blast detail)Scoree value
AT5G65420.1 CYCD4;1 (CYCLIN D4;1); cyclin-dependent protein kinase regulator11712e-128
AT5G10440.1 CYCD4;2 (cyclin d4;2); cyclin-dependent protein kinase8673e-093
AT2G22490.1 CYCD2;1 (Cyclin D2;1); cyclin-dependent protein kinase regulator/ protein binding5511e-056
AT1G70210.1 CYCD1;1 (CYCLIN D1;1); cyclin-dependent protein kinase regulator4032e-039
AT4G34160.1 CYCD3;1 (CYCLIN D3;1); cyclin-dependent protein kinase regulator/ protein binding3262e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  14%
 
94  57%
 
72  29%

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