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Information for unigene UN26428

FASTA Sequence
Unigene ID: UN26428Length: 1632 SSR 
GGACAATCTCTCTCTCTCTCTCTCTGTTGCAATGTCGAAGAGCGGAAGATACTGCTTGGGCTCAATGGAAGACATCCGAGCAGTCT
TCCAGCGCTTCGACAAAAACGGAGACGGAAAAATCTCAATCGACGAGCTCAAGGACGTGATCGGAGCTCTCAGCCCCGCCGCGTCG
CCGGAAGAAACGGCGCTGATGATGAAAGAGTTCGATCTCGACGGTAACGGATACATCGACATGGACGAGTTCGTCGCTCTCTTCCA
GATCGAAGACGGCGGAGTAGGCGGCGACATTCGGGATCTGAAGGAGGCGTTCGATCTGTACGATCTGGACGGTAACGGACGGATCT
CTGTGAACGAGCTTTACTCGGTGATGAAGAATCTCGGCGAGAAGTGTTCGATGGAGGATTGCAAGAGGATCATTAGCAAAGTCGAT
GCTGACGGTGACGGTTGTGTTAACTTTGAAGAGTTTAAGACGATGATGATGAACGGCCGAGCTGCTTGAACTTAACGGCGTTTGTA
TATATTCGATTTTTAGGTTTTATCGATTAATCTTTTGTTTTTTTTTCCTAATTTTATGGATCAATTAGGGATTTTAATTTCTTAGT
GTAAGAGTTTAATCGATTTATTTTTTTAAAATAATTTTCTTTTGATCAAAATTTTATTTATTTTTAGTTATTATGGCCAAGATTGG
TTTGAAACCAGACCCGGTTAACACTAATGCCAAGGAGATTCGTTACAGAGGCGTTAGGAAGCGTCCCTGGGGCCGTTATGCTGCTG
AGATCCGAGATCCCGGTAAGAAAACCCGGGTCTGGCTCGGTACTTTTGACACCGCCGAGGAGGCGGCGCGTGCTTACGACAAGGCG
GCGCGTGATTTCCGTGGGGCCAAGGCTAAGACCAATTTCCCGAACTTTCTTGAGCTGAGTGAGAAGGGCGGCGGTTTCGAGCGTAG
CCCTAGCCAGAGCAGCACCCTTGACTGCGCTTCTCCTCCGACGGCGGTTACGCCGGCGAGTGATGGTATTGTTCCGCCTCAGCTCG
AGCTTCGCCTCGGCGGCGGCTATCAGATCCCGGTGGCGCGTCCTGTTTACTTCTTTGACGTTATGGGAGTCGGCAACGGAGGTCGT
GCTCAGCCTCCGGTGGCGTCAGCTTTTAGGTCGCCGATGATGCATGTGGCTGCAAAGGTGGCTTGTGTGGCTCGGAGCGACTCTGA
TTCGTCGTCGGTTGTTGATTTTGAAGGCGTGATGGAGAAGAGATCTCAGCCGTTAGATCTAGATCTAAACTTGCCTCCTCTGTCGG
AACAGGCCTGAACTTATCGAAGGTGGTCGTGGTCGTGTTCATCTCCGACGGTTATGCGTTTTTTTTTTGTTTGGGAGCTGAGAAAA
GTTCGTTTTTCTCGTAGTTTTTTTTTATTCTCTCACTCTACAATAATTATTATCGGGTTTAAAAAGTTAAATCGGGAGAGAAGAAT
ATAATTTTAGCTGACATGGATCGTTATGTACATATTATTACATAACTGGAGATCTGAACTTTTGTTGTGTGCTTTTTTGCGACTTG
GTTTCACCATGTTGTTCCTCTGTAGCCTTTTATTTTGTTATTGCAAATTTTATATCAATAATTTGGTAATCTTCGTAATTATGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882920 ATERF-4/ATERF4/ERF4/RAP2.5 [Arabidopsis lyrata subsp. lyrata]8402e-087
XP_002870563 hypothetical protein ARALYDRAFT_493755 [Arabidopsis lyrata subsp. lyrata]6181e-061
XP_002888497 hypothetical protein ARALYDRAFT_475742 [Arabidopsis lyrata subsp. lyrata]6162e-061
NP_198593 calcium-binding protein CML24 [Arabidopsis thaliana]6152e-061
AAM67124 calmodulin-related protein [Arabidopsis thaliana]6082e-060

Swiss-Prot top hits (Blast detail)Scoree value
P25070 Calcium-binding protein CML246151e-062
Q9C8Y1 Probable calcium-binding protein CML236051e-061
O80340 Ethylene-responsive transcription factor 45352e-053
Q8RZB5 Probable calcium-binding protein CML103335e-030
Q9FE67 Ethylene-responsive transcription factor 93093e-027

TrEMBL top hits (Blast detail)Scoree value
Q8S2S7 Ethylene responsive element binding factor 4-like protein5041e-048
D5L0Z4 AP2 domain class transcription factor4521e-042
C6T283 Putative uncharacterized protein4134e-038
B3VHW0 Ethylene-responsive element binding factor 43874e-035
B9HZR4 AP2/ERF domain-containing transcription factor3866e-035

Arabidopsis top hits (Blast detail)Scoree value
AT5G37770.1 TCH2 (TOUCH 2); calcium ion binding6167e-064
AT1G66400.1 calmodulin-related protein, putative6051e-062
AT3G15210.1 ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4); DNA binding / protein binding / transcription factor/ transcription repressor5352e-054
AT5G44210.1 ERF9 (ERF DOMAIN PROTEIN 9); DNA binding / transcription factor/ transcription repressor3093e-028
AT1G53170.1 ERF8; DNA binding / transcription factor/ transcription repressor2994e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  13%
 
206  75%
 
211  13%

Unigene MembersMember information