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Information for unigene UN26530
| FASTA Sequence |
| Unigene ID: UN26530 | Length: 1374 |
SSR | | AAAACCCAATTCTCGTCTGCGGCATTATACTGTTACTTGAAACAAGAAATCACAACTTACAATCCTTTCCTGATCTATGCTACTAA
GACAAAAGAGTGTTTACGTGTAGGCTTAAGGTTTGTCTTGGAAGAAATAAAGAATCTAGTTTCTTTAGAATCTTTATAGGAGCAAG
AGGAGTCTCACACAACTCAACTCAAGGTATATGTGTTGCCATGAACTTAGACAATGTACCGCCGCCACTTCTTGGTTTGTGTCCCT
TAGTATCTAATTGGTCCGTCAAGGCTACCTGTAGCAAACTGTTGAACTATTGGATTTGTTGAGGTTGTAAATTCATGAGTCATTCC
TTGCCAGACGATTTTTCCTTCATACAGAAACAATAACCTGTCTACAGCTCTTTGAATGGTGCTATGTTGATGGGTAACAACCAAAT
AAGAGGCGATCTTCCCAGGTTTCCCAAGTGCATCCTCCTCGCCCGTTAAGTGAACAGATCGTATAAGATCTTCAACTACAGTCGAT
GCAATGGGATCAAGTCCAGCTGTTGGCCCATCGTACAAGAGCACCTCTGGCTCTATGACCTCCTTTGTTGTATCGAAAACAAGGGA
ACGAGCTAAAGCAACCCTTTTCTTCATCCCACCAGATAGCTCAGAAGGTAGTCGATTCTCAACACCCTTCAAACCAACAGCTGCCA
AGGTCTGTGTCACAAGCTCAGATATTTGATTCTCAGACATTTTTGAATTTTCATAGAGTAGAAAACCAACATTTTCACGAACTGTA
AGAGAATCAAAGAGAGCCGCACTCTGAAAAACAAGGCCAATACGAAGCCCTGATATCTCCTCATCACTAATCAAACCAGCTCGTTT
TTTCCCTCGTATATAAACCTCTCCCTTGTCGGGAGCAAGAAGACCAGCCATGATCTTTAAAATGGTTGATTTTCCAGTCCCAGAAG
GACCAATCACCCCAACAGCCTCGCCATGTCTAATCTTAAAGGAAACACCTTTCAAGATATGTTTATCCCCAAATGATTTGTAGACA
TCACGACATTCTATAAGAACATCAGAATCATCCCCAGGCTCTCGCAAACCTCCTCCTGACTTTGATAGACTATTGAATTTGGTGGC
GGTGGAACAGCAAAAGACTTTCCGATGGAACGAGCTAATGCTTCTTCTGGACATAGCGACGGATTGGTGGGAAGAAGCATGGAAGT
GTAAACTTGGACGAAGCAAAGAAGAAGAAGAAGAAGAGGATAAAGAAAGCATGATTATGGGTTTTGGGATCTTGAAGAATCGATCG
AAGATGCACCAATTGGGTACCGATTGGGAGAAATCGACACAGAAGAATCAAAAGTGCGGGCTTTGCAGCGTCACACTTCTTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002886917 ATNAP11 [Arabidopsis lyrata subsp. lyrata] | 1418 | 1e-154 |
| NP_564850 protein triGALACTOSYLDIACYLGLYCEROL 3 [Arabidopsis thaliana] | 1330 | 2e-144 |
| AAC27147 Contains similarity to ABC transporter gb|1651790 from Synechocystis sp. gb|D90900 [Arabidopsis thaliana] | 1273 | 1e-137 |
| ACU19761 unknown [Glycine max] | 1196 | 8e-129 |
| XP_002272680 PREDICTED: hypothetical protein [Vitis vinifera] | 1195 | 1e-128 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9AT00 Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic | 1337 | 2e-146 |
| P63358 Probable ribonucleotide transport ATP-binding protein mkl | 344 | 2e-031 |
| P63357 Probable ribonucleotide transport ATP-binding protein mkl | 344 | 2e-031 |
| P30769 Probable ribonucleotide transport ATP-binding protein mkl | 343 | 3e-031 |
| P45031 Uncharacterized ABC transporter ATP-binding protein HI_1087 | 332 | 5e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6TD59 Putative uncharacterized protein | 1196 | 6e-129 |
| C5X5U1 Putative uncharacterized protein Sb02g011310 | 1186 | 8e-128 |
| B9RFV1 Abc transporter, putative | 1183 | 2e-127 |
| B8AP35 Putative uncharacterized protein | 1171 | 4e-126 |
| Q10FF0 ABC transporter family protein, expressed | 1171 | 4e-126 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G65410.1 ATNAP11 (ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 11); transporter | 1338 | 1e-147 |
| AT2G13610.1 ABC transporter family protein | 222 | 3e-018 |
| AT3G13220.1 ABC transporter family protein | 212 | 4e-017 |
| AT3G62150.1 PGP21 (P-GLYCOPROTEIN 21); ATPase, coupled to transmembrane movement of substances | 185 | 5e-014 |
| AT1G27940.1 PGP13 (P-GLYCOPROTEIN 13); ATPase, coupled to transmembrane movement of substances | 183 | 9e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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