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Information for unigene UN26539
| FASTA Sequence |
| Unigene ID: UN26539 | Length: 1118 |
SSR | | GTAGAAAAGTTCTCTTATTGTAAAAAAAGTAATCAAAGAAACAGAGTATTATTCAATCATATAAAACTGTACACAGCAGTCATCAT
CAAAACTAGCAAACTGAACAAGAACACGTAAAACTGGTGAGATGTCGTGGGGAAACATAACCGGGCTCCAACTAGAAGCCATCCGG
ACTAAGCGGCACAGTCCTCTTCTTTTAGAAAGCACTGAACTTGCTCAAAGGCCTCAATGGCGATTTCAGCTGGGGTAAGATCTGAC
ACGTTTCTGTACCCGATCTTTGACGTGATATTCTCCAAAGAGACTCTCGCGCTGGCGTTTGTGTATGCTTCACCACGTGCTTCCCA
TATAGTTGAAAGACGGTTTAAAGCCACTGTGTATGGGTCTCCTCCTGACTGATCATCATGTAACAATGGTCTTGAATTAGTTCCCA
CAGCAGCAATTCTTTGCGCTAAGGCTTCTAAGGGAACATCAAGCCAAATGCTAATACCTTTATGCATGTACTTCCAATTAATGGGT
CTTATAACAGCACCTCCACCAGTTGACACAACAACTTGGTGGTACATCAGAGAGAGCTTCTTTAGTGCCTCCGTCTCTTTCTCTCT
GAAGACACTCTCACCGAAATGCTCAAATATCTCAGTTACAGAAGTTCCATTCATCGCCTCCTCGATCAATGTGTCACAATCAAAGA
AGGAATAACCAAGTGCTCTTGCCATGATCTTTCCTACTGTCGTCTTCCCGGAACCCATCATTCCAACAAGATACATAGATCGTCCA
TTTAAATACGGTTTAACCTCTTCAGCTTTTCTCTTCAAAACAAGTTCTTCATCAAGTGGAGAATGAAGAATATTTCCAGTTTCCAA
CAATGCTGAGGAGTTCTTGTCCGAAACTGATCTTTGTCGAAGATCCCTTCTTTTGTCAGGTTTCAAATGAGCTATAAGCCATTTAT
TCTCTTTGACTCGCTGAGAGTAACGTAGAGAACCACGAGGTTTCCCTTCAAAATTTCTCCAATCAATATATGGTGCGGAGTAGTGA
AACCTCTGAACAGCTTCCATATTCTTTTCCCCTGACGGCGGAGCAAACACGAGATGCAGAGGCTCTCTCTCTCTCTCTCTTCTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_195664 shikimate kinase 2 [Arabidopsis thaliana] | 1191 | 2e-128 |
| XP_002866854 shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata] | 1171 | 5e-126 |
| 3NWJ Chain A, Crystal Structure Of Shikimate Kinase From Arabidopsis Thaliana (Atsk2) | 1068 | 4e-114 |
| NP_179785 Shikimate kinase [Arabidopsis thaliana] | 984 | 2e-104 |
| BAC43483 putative shikimate kinase precursor [Arabidopsis thaliana] | 979 | 9e-104 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SJ05 Shikimate kinase, chloroplastic | 984 | 1e-105 |
| Q00497 Shikimate kinase, chloroplastic | 698 | 1e-072 |
| Q31PU5 Shikimate kinase | 325 | 3e-029 |
| Q5N4D3 Shikimate kinase | 325 | 3e-029 |
| Q8DKH7 Shikimate kinase | 309 | 2e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GY88 At4g39540 | 1191 | 2e-128 |
| Q9SVA4 Shikimate kinase-like protein | 946 | 4e-100 |
| A8MRG1 Uncharacterized protein At2g21940.3 | 865 | 1e-090 |
| A5AZY1 Putative uncharacterized protein | 761 | 1e-078 |
| B9VU88 Shikimate kinase | 761 | 1e-078 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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