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Information for unigene UN26554
| FASTA Sequence |
| Unigene ID: UN26554 | Length: 1095 |
SSR | | GGAAGCCCTTTTTCGGAATTTTGTATTTAGATTTAAAGAAGAGATGTTTGTTTTCTTTAGAATCTGTCTCTATAAGCTGTTCCATA
CACAATGAGATAGGGTACTGTCCGAACAACTGTGTCAATGGGAATGGCAAAGTTCACACCCGAAGACATTCCGGTCCCTTTGCGGG
TGAATGTGGCAGTGTTGATGCCTATGGTATGGCCATAAGAATCAAGCAATGGCCCTCCAGAATTGCCTGAGTTAATGTCAGCATCT
GTTTGTATAGCTTCTCGAATACTCTTCCCGTTTGGTGAAGGTATCTCTCTTCCCAACCCACTCACTACCCCTATTGTCAAAGTGTT
TTCATATCCATAGGGATTCCCAATAGCAAAGCAACTCTGACCTACGCGTAGATCACTGGAGGTACCAAGAGCAACAGGTTTCAACT
CACGTCCTTCGGTTTCAATCTTCAAAACAGCAAGATCATTGTCGGGATCAAGACCCACAATTTTCCCTTCCTTGGTAAACTTTGTC
CCCATGGCATCAACTAGAGATACCTTACAACGTTGTAATCCACTCTGATCTGTAGCTAACTTGGCAATCACATGGTAATTTGTCAC
AATGTGACCAAGCTTGTCCCAAACGAAGCCAGAACCCGTCCCTTCGATCTTTGCATTATCCTCAACATTGGATTCATCAGAGGACG
TTTTGGGAAGCTCAATGTCTTCGATATACACAACAGACGCCGAAGTTTTCTGGAAGAGATTGACATTTCTCTCTTCTTCTTCCTCG
ACCTCTTCTTCTTCTTCTATTTCTTTCATTTGCTCTAGTGCGATCGCAGATTCAACTGGGAACTTCGGTTGATTGGAGGAGCCAAG
CAGAGTCGACGCGAGCACCAGACTCGAACCGAAGAAGATCAAGCTTCTTCTTTTCCGATCAGGGCTCGAACCGGAGCAAGCTAACA
TTGACTTCGACCTATTGAATGGAGTTATTAAAGTATATAAGACTGAGGAACAAGCTTTAGAAGAAGCGATAGCCACGTCCATCATG
GCTTCTTCTCCCTTCCTTCTCCAAGCTCTCGGCTCGCACTCCCTCTACCACCAACTTACACCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002870050 hypothetical protein ARALYDRAFT_493027 [Arabidopsis lyrata subsp. lyrata] | 1336 | 3e-145 |
| NP_567552 protease Do-like 5 [Arabidopsis thaliana] | 1316 | 7e-143 |
| AAF24060 putative protease HhoA precursor [Arabidopsis thaliana] | 1308 | 6e-142 |
| T04533 hypothetical protein F28J12.30 - Arabidopsis thaliana | 1170 | 6e-126 |
| XP_002519655 Protease degS precursor, putative [Ricinus communis] | 993 | 2e-105 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SEL7 Protease Do-like 5, chloroplastic | 1316 | 3e-144 |
| Q9LU10 Protease Do-like 8, chloroplastic | 509 | 1e-050 |
| O22609 Protease Do-like 1, chloroplastic | 383 | 5e-036 |
| P05676 Uncharacterized serine protease syc0938_d | 283 | 2e-024 |
| P18584 Probable serine protease do-like | 274 | 2e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S0Y6 Protease degS, putative | 993 | 1e-105 |
| B9HYW4 Predicted protein | 953 | 6e-101 |
| B4FVF7 Protease Do-like 5 | 803 | 1e-083 |
| Q2QM57 Protease Do-like 5, chloroplast, putative, expressed | 791 | 4e-082 |
| A2ZMS2 Putative uncharacterized protein | 789 | 6e-082 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G18370.1 DEG5 (DEGP PROTEASE 5); catalytic/ serine-type endopeptidase/ serine-type peptidase | 1317 | 2e-145 |
| AT5G39830.1 DEG8; peptidase/ serine-type peptidase | 509 | 1e-051 |
| AT5G39830.2 DEG8; peptidase/ serine-type peptidase | 445 | 3e-044 |
| AT3G27925.1 DEGP1 (DegP protease 1); serine-type endopeptidase/ serine-type peptidase | 383 | 4e-037 |
| AT5G27660.1 catalytic/ protein binding / serine-type endopeptidase/ serine-type peptidase | 238 | 3e-020 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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