 |
Information for unigene UN26571
| FASTA Sequence |
| Unigene ID: UN26571 | Length: 996 |
SSR | | GCGAGGTCACAGACTACAGTTTTACGGCTGATATGTAGACTGAGCTTGACAACGTTTCTGGTGGTGTAACTGAATGGAAAGGTCTC
CTAAGAGACTACTGGACACGATTCAGCGCTTATTGTAAACGTGTCTAAAATGTCCAAATCCAACAGGTGGAAAAAATGTTGGAAAA
AAGATACGAGGACTTTTTGTTTTCTTCCCTTCCCGATCCCACACGGACTTGCCCGAGTTGTTCGGAAGGCACATTAGTTTTCAAAG
TTAGCAAGTTTGGTTCTGGTTATTTCATTGGTTGTGATGGCTACCCTTCATGCAAGTTCGTTGCCAAAACACTATATGGAGAGGAT
GAAGATGAAGATGATCCTCCAAAGAATACCTGCGTAGAAGAGCCCAAATTACTGGGTGTTCATCCCAATACCAGTGAGAAGGTTAT
TTTGAAGTGCGGCCCCTATGGGCATTATGTACAGCTTGGTGAGGACAAAAAAGGACACGTACCAAAACGAGCAAATGCGTCCCATA
TAAAGGATGTGAACTCTATTACGCTTGAAGGTGCTCTCGAATTATTACGCTATCCTCTGACACTGGGAAACCACCCTGAAGATGGG
CAGCCTGTGTTCTTGAAGCTTAGTAAATCTGGATTTACTGTTCGACATCGCCGCACTATGGCTACTGTTCCCAAGAACGTTGAACC
AGGTGAGGTTACTTTTGAGAAAGCAATGAAGCTCTTGTCTGGCAAAAATGTGAGACTGTGTGGCAGACCTAAGAGGAAGCCAACAG
TTGTAGATGAGGAGGAAGAAGAAGAAGAAGGAGATGAAGAAGCTGTGGAGGCGTGAAGCCATTGTGCTAATTTACAATTGGTTAGT
GAGCTTTCCATCAACGTGAACTATTTGAATATTCTTTTTGGTAATCAGAGTAATAATCGTAATAGTGAGAAAAAGATTGCATACAG
TTGTAAAACTATAACACATTTGTTAGTGATATAAAAGTTCGATTATAACC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002869340 DNA topoisomerase family protein [Arabidopsis lyrata subsp. lyrata] | 1211 | 9e-131 |
| NP_194849 DNA topoisomerase, type IA, core [Arabidopsis thaliana] | 1210 | 1e-130 |
| CBI20809 unnamed protein product [Vitis vinifera] | 969 | 1e-102 |
| XP_002280960 PREDICTED: hypothetical protein [Vitis vinifera] | 947 | 4e-100 |
| XP_002330833 predicted protein [Populus trichocarpa] | 940 | 2e-099 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q4UM42 DNA topoisomerase 1 | 374 | 5e-035 |
| Q9ZDK2 DNA topoisomerase 1 | 369 | 2e-034 |
| Q68X45 DNA topoisomerase 1 | 368 | 2e-034 |
| Q1RIM1 DNA topoisomerase 1 | 360 | 2e-033 |
| Q92IH1 DNA topoisomerase 1 | 341 | 3e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9N6D9 Predicted protein | 940 | 2e-099 |
| B8B0L5 Putative uncharacterized protein | 793 | 2e-082 |
| B8AHL0 DNA topoisomerase | 760 | 1e-078 |
| B9EZZ0 DNA topoisomerase | 760 | 1e-078 |
| O49571 DNA topoisomerase like-protein | 739 | 3e-076 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
