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Information for unigene UN26623
| FASTA Sequence |
| Unigene ID: UN26623 | Length: 1194 |
SSR | | AAAATAAAATAGTTTTCTATAAAATAGAAGTACATGAACATAATAAAACGAGTTTTGCTTGCGTTCGCATAAGACATACAAACAGC
AGGAGAAGAAAATAATCTCAAAGTGATTGGAAAAAAAAGACTTATTCTCGAAAGCCCTACAATGGCTATAAATCCTCTTTTCCAAT
ATCTCACACTATAAAAAAAAAAACAAGAAAACAAAAGAAACATATAACCTCTAGTACAATCTGCCTCAAAACACCAAACCTTAAGA
CATAACCCCCAAGAAGAATAACCATTACATGACAATAAAGAAAACTAAGGAAGAAGGATCATTCTTGTTTTTTTTTTTGTTTTTTT
TTGTTTGAACTCTTCTTATGTATTACTGCCTCGCCGGAGACTTGACACAGTTTCTACCGTCCCTCGTTGAAAGAAAAAAAAGAAAG
CAGAAAAGAAAAAGCCTATGAAGAGGGAGGAGGACCAATGAATTTAGAAAACCAAACCATGAGGGATCTTTTTTCTGGTTAGCTCT
AAGCTGATGATGATATGATCAAAGTTTTTTCCTCATGGGCTTCGCTTTGTATGAAGATAAATCTAAGAGATTCCAGATCGTTCACC
TTGATGGCTCGCCTCTGTTTGGTTGTCTCTTGTTCACACTGTAACTCCCAACATAACCTGGAGACGAACTTCTACCTGAAACATCC
GAGGAAGGACCTCCTCCTCCTGCTCCTCCAATCCCATAGCTAAAAGAAGCAGGCCCTTCCGTCTCAGGCGTGGGTGATCTCCACGT
GGGATCACTATACACCGCACCATTCCCATAAAACTCTGCAAGCCCTGCTCCATCGTAACCAATGTTGTTGTTGGCAGCAGAGGCAG
AAGAAAATGAAGACGACGACGGTGCTGCTGCCGCCTTGCTAGGAGGCCCTATGTTCCTCGCTGCATATCCACCTGTCCCCAACCCA
AAACCAGATTCACCGTTTCCTCCGTAACCAAACTTCACATTCTCGTTACTACCAACAACAGCATTGTTTCCACCTCCTCCAGGAGC
ACCCCAGTTTCCAAATGGACCGCTAAGAGTGTTGTTCCCACTTGTTGATCCTCCTCCTCCCATGTATGTATTGGAGTTTGAGTTGT
TGTTGTTGTTGTTGTTATAGTTAAGACCACCGTTGTTTCCCCATAGGTTCCTTGTAACCGAACTAAAGAAGGACGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_850539 RNA recognition motif-containing protein [Arabidopsis thaliana] | 811 | 3e-084 |
| XP_002882552 hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp. lyrata] | 810 | 4e-084 |
| AAF21191 putative RNA-binding protein [Arabidopsis thaliana] | 790 | 8e-082 |
| NP_566321 RNA recognition motif-containing protein [Arabidopsis thaliana] | 790 | 8e-082 |
| AAK92717 putative RNA-binding protein [Arabidopsis thaliana] | 790 | 8e-082 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54KD5 P17/29C-like protein DDB_G0287399 | 160 | 4e-010 |
| P08673 Circumsporozoite protein | 149 | 7e-009 |
| Q9NL38 N66 matrix protein | 145 | 2e-008 |
| Q9UI36 Dachshund homolog 1 | 133 | 5e-007 |
| Q54M35 Putative lysozyme-like protein | 130 | 1e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8W555 AT3g07810/F17A17_15 | 790 | 5e-082 |
| Q94A00 Putative RNA-binding protein | 790 | 5e-082 |
| Q9SFD3 Putative RNA-binding protein | 790 | 5e-082 |
| A5C205 Putative uncharacterized protein | 216 | 2e-015 |
| Q0WMC1 Putative RNA-binding protein (Fragment) | 190 | 2e-012 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G07810.2 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | 812 | 9e-087 |
| AT3G07810.1 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | 790 | 3e-084 |
| AT5G61030.1 GR-RBP3 (glycine-rich RNA-binding protein 3); ATP binding / RNA binding | 137 | 2e-008 |
| AT3G18810.1 protein kinase family protein | 136 | 2e-008 |
| AT1G65440.1 GTB1; RNA binding / hydrolase, acting on ester bonds / transcription elongation regulator | 129 | 1e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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