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Information for unigene UN26648

FASTA Sequence
Unigene ID: UN26648Length: 1143 SSR 
AAGAAAAAAAACAGTTCTCTTAATAATATATGCTCATTTTCAGGATTGGTCTATGTAAGTCATAATATAGTAGACATTAACAGCCT
TTTTATCTGTTGACAGAGAACAGTTAGGCACTTAGTGAAACGGAGAGGATGGACGATAGCTTGAACTTCTTAATCTTTTCAGAGTC
TCGTGGCTGGAACACAACCTCGGTGCTCGACCTTACAGTCACTTCCTTCGTCTCTGATCCTGAACTGCCTTCACTTCTGTAGTCCC
TATACGAGTACAGAACCTGCAACCTTGTTGGAGCGAAACCAAGCATGCTAGTTTGCTGAATAGAGATACGGTCAACTTTTGATCTT
TTGATATGTCTCAAAGCCGAAGTGTCTTCCTCCTTTCCTTTAAACTCCAGGAATTCCCCTAACACAATCTTGCTGTTTTTAAGCTA
CCCTATCCCAGACTGGTGCAGAGCCAAGGACGAAGTTAAGTTTTTGATGCGAAGAGTCTTGCATCTCTTTTCCTGTGCTGCTGAAG
GCGCCTTTGACCCAACCAGAAAGAATGTTTCTTGAGACTGGTTTCAGATGTTGCCACTCTTCGTAGGTTATTACCTCACGAGGAAA
TGCATGCATCGTACGAAAATTTGGATTGGGAATGACAACTTTGGAAGAGATACTTCCTTCAGGTAAAGTAACGCCTCTCTGTTCAA
GATATGACTCAAGAACTGAAGCTTGTTTCTTCACTTCAGCCAGAGGATCAGGGTAAGCCTGAGTGGAATGATGATGCTTGCCACCT
TCACAAACCCAGCTTCCATCACTCGTTACAGTAACAATTCCATGTAGATTCTTAACACCGATCACCTCAACTTGTCCATTAGTGAC
GAGGACAAGATCGATGTCCTGTCTAGAAGAAGTGTCTGCATCTGGAATTCGAAGCCCTACATATGCTTTTCCCCCGTATACCTTCT
CCAGTCTGTGAGCAACGGAGAAGAGAGCGGTTGAGTCGGAGGTTTCTACGTCGGAGAAGTCGTCGTTGGAGAAGAAAAGGCGAACG
AGTTTGTAGATCGCCAGCGCGCATATTATCCCCACCCACATCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCGATT
CGATTTTGGGTATAAAGTGCACTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAF06036 EST gb|AI998705 comes from this gene [Arabidopsis thaliana]9252e-097
NP_176682 uncharacterized protein [Arabidopsis thaliana]9252e-097
XP_002888301 hypothetical protein ARALYDRAFT_475506 [Arabidopsis lyrata subsp. lyrata]9252e-097
XP_002319251 predicted protein [Populus trichocarpa]7012e-071
XP_002272266 PREDICTED: hypothetical protein [Vitis vinifera]6724e-068

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q5XF12 At1g650209251e-097
Q9SS58 F16G16.1 protein (Fragment)9251e-097
B9I745 Predicted protein7011e-071
C6TCS6 Putative uncharacterized protein6633e-067
C6T8N8 Putative uncharacterized protein (Fragment)6581e-066

Arabidopsis top hits (Blast detail)Scoree value
AT1G65020.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 53 Blast hits to 53 proteins in 19 species: Archae - 0; Bacteria - 18; Metazoa - 9; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).9256e-100

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information