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Information for unigene UN26730

FASTA Sequence
Unigene ID: UN26730Length: 1325 SSR 
AAAGGTCAATGACGAATAATATTAGTGATAAGAAAAATTTCAATCAAATGGGTTCATTGAACCGTTGATTTGTTTCAGTTTATTTA
ATCACACTTAACTTATGTAACCAAACCATTAAAGAGATTACAAAAGAACAAAGAAAATCGTTTTGGTGGGTAAGCTTTTGCTTCTC
TACCTAAACGACACCGTCTGTATTTCACATTACAGAGTAGCTCCGTTACTTTTTCTTTATCTCACATTCTCACGTCCGCTCATTTT
TAAACGCCGTCTCTTTCGTAATAAAAGAAACGTCCCAAGGATCTGGCATTGATCGCCGCGTGGATACTCAAAAACGCCACGTGTCT
TCACCCCGCCATATATCGGGTCGTGAAGACTCCGAATTCTTGCCCACGCAGTTCCGGATTCCCCGGGTTACCCGGTCGGATTCTTT
AGTATCCGAAAATTCTTTTTGAATAATCAAATACTCCATAGCCTTTCAGTAAATTCGACCCGTTTTCTCCGGGTAGACCCGAGTTA
GAAGCGTCCAATTCTCTGGGAATCTCAACAACTATACCGACTAAATCAATCGGTTCCCTCTCACACGCTTCCGTCGGAAACCTCAC
CGGCGAACCAGAGGACGAAGACGGCGTGGAGGATTCTGATTCGTCCGACGAAGACGAGCTTCCAGCTTCGGTATCCTCAATTGGCT
TAACCGATTGAAACACGGGAGCAACCGGTTCTGAATTCCTCGAACCGGATTCAGTAACCGACTCCTCGGGTTGAACCGGAGCTCTG
CAAAGCGGACAGCTAGATCTCGACCGGAACCATGTGTCAATACACTCCACATGGAACACGTGGCCACATTTTGGAAGGACACGTCC
TTCGTCTTCTTCCTCGAATTCCGACAAGCAAACGGAGCAATCCTCGAGCGGAGTTTTATGGGTTTTAACGGAGTAGACGAAGATCG
GGATCTTCTCGAGCACCGTCGGGTAGAGAGGAGAGAGGGAGGAGGACTGTGTGGGGTCTCGAGCGGCTGACAGAGATCGGAGGTGA
GCACTGATACGGCGGCGAATACGGCGGTTTTGACGACGGAACAACCATCTGGCGTAGCTGTGGAAACAGAGGATTAGAATGACGGC
GACGAAGAGGATGATCACGGAAGCGAGCATGATCTTGCCGTTGAGGGAGTAACGTGAGGAAGGTCCAGGGGTCATGCTTCCCCATA
GTGTCTTGCTATGGTCAGCAACTATGCCCATTGTTTTAGGGAGAGAGAGAGAGTGAAAGGAAGACGAAATATTTTAGAGAGAATGA
AGTGAGTGGGTGATCGAAGAAGAGAGTGGGAGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878471 hypothetical protein ARALYDRAFT_907844 [Arabidopsis lyrata subsp. lyrata]10856e-116
NP_191828 RING-H2 finger protein ATL5 [Arabidopsis thaliana]10847e-116
AAD33583 RING-H2 zinc finger protein ATL5 [Arabidopsis thaliana]10703e-114
XP_002882123 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]6053e-060
NP_182278 RING-H2 finger protein ATL64 [Arabidopsis thaliana]5758e-057

Swiss-Prot top hits (Blast detail)Scoree value
Q9LZJ6 RING-H2 finger protein ATL3L10843e-117
O22255 RING-H2 finger protein ATL2N5753e-058
Q8L9T5 RING-H2 finger protein ATL3F3712e-034
Q8LF65 RING-H2 finger protein ATL4G2456e-020
Q9LF64 Probable RING-H2 finger protein ATL5G2142e-016

TrEMBL top hits (Blast detail)Scoree value
Q0WRF5 RING-H2 zinc finger protein ATL510845e-116
B9N029 Predicted protein3991e-036
B9RT88 Ring finger protein, putative3812e-034
B9HXR4 Predicted protein (Fragment)3793e-034
Q4FE42 At3g167203712e-033

Arabidopsis top hits (Blast detail)Scoree value
AT3G62690.1 ATL5 (ATL5); protein binding / zinc ion binding10843e-118
AT2G47560.1 zinc finger (C3HC4-type RING finger) family protein5753e-059
AT3G16720.1 ATL2; protein binding / zinc ion binding3711e-035
AT4G33565.1 protein binding / zinc ion binding2591e-022
AT4G15975.1 protein binding / zinc ion binding2439e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  50%
 
191  25%
 
81  25%

Unigene MembersMember information