Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN26737

FASTA Sequence
Unigene ID: UN26737Length: 882 SSR 
GCACTTGAACAGAAATGATCTCACTTATTACTCCATACATATACAAACAAGTACAGTACAAGATTTCTTATATTACTACATCTCTC
TGGTCTCCAACTTCGATATCGCTTTAAGACTTATGAAACCCACTAAACTAAGAGCTAAAACAGGTCTGTTTCTCCCTAATGAACAA
CAATGTTAACAACATGAAGTTGGTGGTGCATCAAAGAAACACAAGAGTTGCATCTTGAGCTGAAGCTTGTTTAAATGTCTTATCCA
ACTTTCAACATCAAAGCAGCCTTGAGCTGATCATGATTGAAAAACTGGCTTCCCATCTTCACAGTAGCTTGTTGAATCATCAAATC
ATTCACCACAGATAAGCTAGCATGATTCACTTCCAAATCCAACTCCTTGAGCGCTTCCATGAACCTCGCACCAGGATGATTCTTCT
TGCCGCATTGTACACGTATCATCACATCCCAACCTATGATCTTCACATCAATCTCCATTTCCACAGAACTCCCCGAATCTCGATTC
GATTTCCGCTCTTTCCCCCTCCTCGACCCGCCACCTTCCTTCCCCATCCCATCTAGCTGCTTCTGAACCTCTTCCTTATCGGCCTC
CGCTTGCTGCAGCTTCGTTTTCAGCTCGTTGATGTACGAAATGGCGTCTCCTAGAAGAGGTTGAGTTTGTTGTGACCAGTGATTCG
TTCCGATGAAAGCTTCCACGGCGTTATCGTTGTCGGCGGGGGGTGTTGACTGGTTGAGGAAGTAGTTGCTCATGTGAGGATCCGGT
GGAGAGAGAGAGACACGGCTTCGATGATCATCCATCTGAAAACCGCACAGAGGAAGAGAGCTTACGTGTTTTTTTTTCTGAGGTTC
ACGGGGAGAGATGAAGATCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33793 unnamed protein product [Thellungiella halophila]5924e-059
XP_002865164 hypothetical protein ARALYDRAFT_916752 [Arabidopsis lyrata subsp. lyrata]5772e-057
NP_199488 transcription factor ATR2 [Arabidopsis thaliana]5745e-057
AAL55712 putative transcription factor BHLH5 [Arabidopsis thaliana]5745e-057
XP_002868032 basic helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata]5182e-050

Swiss-Prot top hits (Blast detail)Scoree value
Q9FIP9 Transcription factor ATR25742e-058
O49687 Transcription factor MYC45043e-050
Q39204 Transcription factor MYC23735e-035
Q9LUK7 Transcription factor bHLH282866e-025
O23090 Transcription factor bHLH141844e-013

TrEMBL top hits (Blast detail)Scoree value
Q25BJ5 Basic helix-loop-helix (BHLH) family transcription factor5063e-049
Q41102 Phaseolin G-box binding protein PG2 (Fragment)4151e-038
Q700C0 MYC transcription factor (Fragment)4023e-037
C6FHY2 BHLH domain protein4014e-037
Q700B9 MYC transcription factor (Fragment)3971e-036

Arabidopsis top hits (Blast detail)Scoree value
AT5G46760.1 basic helix-loop-helix (bHLH) family protein5742e-059
AT4G17880.1 basic helix-loop-helix (bHLH) family protein5043e-051
AT1G32640.1 MYC2; DNA binding / transcription activator/ transcription factor3743e-036
AT5G46830.1 basic helix-loop-helix (bHLH) family protein2874e-026
AT4G00870.1 basic helix-loop-helix (bHLH) family protein1844e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  67%
 
101  33%

Unigene MembersMember information