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Information for unigene UN26813

FASTA Sequence
Unigene ID: UN26813Length: 1357 SSR 
GACAATCATCTCAACTTCTCTCTCTCTCTCTCTCCTCCCTTCTCCTGAAGCTCCTCACTCACTCTTCTCTGAGTAAAAGAGAAAAT
GGCTGTGCCTAAAGCCATTGTTCTACCTCTGTTCCTAGTCTTATGTGGTGCTGCTCTTGGAGCTTCTGCTTATGAAGGATACCTTC
GTAATGGCAACTTCGAGGAGTCACCAAAGAAAACCGACATGAAAAAGACAGTCCTAATCGGCAAAACCGCCTTACCCGAATGGGAA
ACAACCGGTTTCGTCGAGTATATCGCCGGTGGTCCCCAACCGGGAGGCATGTTCTTCCCCGTTGCTCACGGTGTCCACGCCGTGAG
GCTCGGAAACGAAGCAACGATCTCTCAGAAGCTAGAAGTAAAGCCAGGCTCTCTCTACTCACTTACCTTCGGTGCATCAAGAACTT
GTGCACAAGAAGAGGTCCTTCGAGTCTCTGTCCCTCCTCAGACCGGTGACTTGCCGCTTCAGACACTCTACAACAGCTTCGGAGGT
GACGTGTACGCGTGGGCTTTCGTCCCCAAGACTTCTGAGGTTACGGTGATTTTCCATAACCCCGGAGTTCAAGAAGATCCTGCTTG
CGGTCCGTTGTTGGACGCTGTGGCCATTAAAGAGCTTGTTCATCCAGAGTACACCAAAGGGAACTTGGTGAAGAACGGAGGGTTCG
AAGAAGGTCCTCACCGTCTTGTGAACTCAACGCAAGGAGTGCTCCTCCCACCTAAACAAGAAGATGTTACGTCCCCTTTGCCTGGA
TGGATCATAGAGTCTCTCAAGGCAGTGAAGTTCATAGACTCCAAGCACTTTAATGTTCCCTTTGGAAATGCTGCGATCGAGCTTGT
GGCGGGGAAAGAAAGTGCTATTGCGCAAGTTATTAGGACTTCACCAGGTCAAACCTACAGCCTATCTTTTGTTGTTGGAGATGCTA
AAAATGACTGTCATGGTTCCATGATGGTTGAAGCTTTTGCGGCTAGAGATACATTGAAAGTGTCGCACACTTCAGTTGGTGGAGGT
CATGTTAAGACAGCAAGTTTCAGGTTCAAGGCGCTTGAGGCAAGAACAAGAATTACTTTCTTCAGTGGTTTTTACCATACTAAGAA
AAGCGATATTGGATCTCTTTGTGGACCTGTCATTGATCAGATTGTGGTTTCTCATGTGGCTTAGATCTATTGTAATCTTTATGACC
ACTGTTGCCGTGGATTTGGTTCTTTGCTTTTGTATGTCTTGCATCTTGCTCCTTGTGGCTTTAAGTTATAGCCTTCGAGTTACTTA
CTGATATATATTGTGATATCAGAAGTTTTGAGTTAAACAAATAATCAAGAACTTAAAAGTTAGAGCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566328 uncharacterized protein [Arabidopsis thaliana]17702e-195
XP_002882567 hypothetical protein ARALYDRAFT_478145 [Arabidopsis lyrata subsp. lyrata]15963e-175
NP_974254 uncharacterized protein [Arabidopsis thaliana]15831e-173
XP_002517797 conserved hypothetical protein [Ricinus communis]13689e-149
XP_002276894 PREDICTED: hypothetical protein [Vitis vinifera]13572e-147

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9SFB1 F17A17.37 protein17702e-195
Q9C6U3 Putative uncharacterized protein T8G24.2 (Fragment)15837e-174
B9RVM8 Putative uncharacterized protein13686e-149
B9HNR7 Predicted protein13345e-145
A9PCQ2 Putative uncharacterized protein13061e-141

Arabidopsis top hits (Blast detail)Scoree value
AT3G08030.1 unknown protein17716e-198
AT3G08030.2 unknown protein15843e-176
AT2G41800.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41810.1); Has 156 Blast hits to 155 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).11193e-122
AT2G41810.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41800.1); Has 161 Blast hits to 157 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).11068e-121
AT5G25460.1 unknown protein10262e-111

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  67%
 
201  33%

Unigene MembersMember information