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Information for unigene UN26942
| FASTA Sequence |
| Unigene ID: UN26942 | Length: 1052 |
SSR | | GGGAGAGGAGAAGCTACAGGTAACGGACACCACAAGCAAAAAAGCGATCTGGTCTCTCTCTCTCTATACTCTGATATCGTCAATGG
CGGAGGTGGAAGAGCTTAAGAATCTGGAGACAAATAAATGCAAACACAACAAGCGGAAGCCATGGGACGATGGCCCCTGCCTGGAC
CGTTGGGAAATCGAGAAGTTCGATCCGTCATGGAATCCGAGTGGTATACTCGAAGTCGGCTCCTTCTCCAGAGCGTATCCTCGACG
CAGAGAGAAGCATCTTCTCAAGTGTTGGCCCAGAGTCAAATCCGCTCTCGAGGAACACGGCGTCTCCTGCGAGCTCAACGTGGTTG
GACGTTATATGAGTGTTTCGAAGACCAAGATGACGAGAGATCCGGACATCATCGTCAAAGCTAGAGACTTGCTTAGGCTTCTGGCG
AGAAGTGTCCCTGCTCGTCAGGCACTTAAGATTCTGGAAGACGACATGGCTTATGATATCATGAATATCCGCCGTATGGTGGTTGG
ATCAAAGGAGTATTTTCTAATAAGAAGGAATCGTTTTTGGGGTCATAATAAGTCTTCTACCTTAAAGGCGCTAGAAACATCAACCA
ACTGTTTCATTCGGATGCAGGGTAACACTATTGCCGCAATGGGTTCTTTCGGAGGTCTCAGACGACTGAGAAGTATTGTTGAAACA
TGCTTCTATTCTCATAATCGTCCTTTGGATGTCTTGAGAGTGATGGATGCAGGGGATAGCTGCAATGGGCTTGAAGAGATGGATGC
AGAGATGAGTCCTCCACCTATAAACTATGAATACATACGGAGGAGGTCTTTGCAAGTTCGAGGATCTATGCTTCCTTGGTGTTCTC
CAGTAGGTTTTAAGAGATTGAAGCATACTGGAGTTTAATCACTCTGTGGACAAATCAACCTTAACCTATCTTATCTATGTCTCTCA
TCCTGCTTTGTTTTATTTACGCCAACTTAATCTATGTATTTTCTTTATGGACTCGAACTGAATCAGTCTGGACATTTTCTTTTATT
TTATCCACTATATATTTCAT
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| GenBank top hits (Blast detail) | Score | e value |
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| AAM64563 rev interacting protein mis3-like [Arabidopsis thaliana] | 601 | 5e-060 |
| NP_196459 RNA-binding KH domain-containing protein [Arabidopsis thaliana] | 601 | 5e-060 |
| XP_002871325 hypothetical protein ARALYDRAFT_487679 [Arabidopsis lyrata subsp. lyrata] | 595 | 3e-059 |
| XP_002513405 Ribosomal RNA assembly protein mis3, putative [Ricinus communis] | 593 | 5e-059 |
| ACU19995 unknown [Glycine max] | 593 | 5e-059 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P25586 Ribosomal RNA assembly protein KRR1 | 427 | 4e-041 |
| O74777 Ribosomal RNA assembly protein mis3 | 409 | 4e-039 |
| Q8BGA5 KRR1 small subunit processome component homolog | 404 | 2e-038 |
| Q13601 KRR1 small subunit processome component homolog | 400 | 5e-038 |
| Q3B7L9 KRR1 small subunit processome component homolog | 391 | 5e-037 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LBT7 Rev interacting protein mis3-like | 601 | 4e-060 |
| Q9FT93 Putative rev interacting protein mis3 | 601 | 4e-060 |
| B9RI36 Ribosomal RNA assembly protein mis3, putative | 593 | 3e-059 |
| C6TDU3 Putative uncharacterized protein | 593 | 3e-059 |
| B9HH12 Predicted protein | 570 | 1e-056 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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