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Information for unigene UN26983

FASTA Sequence
Unigene ID: UN26983Length: 1692 SSR 
CATAACTCTTCTCCTCCTCCTCTCTTCTCCTTCTTTCTTCACTATCGGGTTGCATTTGGCGCGAAAAGTTCTTCTCTTTTCGGACA
GCTTTCTCTCAGTTTCGTTTTCAGACAGCTTTCTGTTTCGTTACAAATAAAAGATGCCAGTGGCATTAGTTTTGCTGCTGGCATTG
AGCTGTCTTGTTAAGAGTTACGGCGCCGGAAACGTGTGCGATCTCTTCCGGAGACCCAGCACGAGACCGCACAGTGTCTCGATTCT
GGAGTTCGGTGCTGTTGGAGATGGGAAGACGTTGAACACGATCGCGTTTCAGAACGCTGTCTTCTATCTCAAGTCTTTCGCCGATA
AAGGCGGTGCTCAGCTCTATGTTCCTCCCGGACGGTGGCTCACCGGTAGTTTCAATCTCACCAGTCACCTCACTCTCTTCTTCGAG
AAAGACGCAGTCATACTCGCCTCCCAGGACCCATCGCATTGGCAAGTCGTGGATCCGTTACCATCATATGGACGAGGCATTGATCT
ACCAGGGAAGAGATACATGAGTTTGATAAACGGCTATGAGCTACATGATGTAGTAGTGACAGGTGATAACGGTACTATAGATGGAC
AAGGCCTGCTTTGGTGGGATCGGTTTAACTCTCGTTCTCTGAAGCACAGTAGACCGCATCTCGTCGAGTTTGTCTCTTCTGAGAAT
GTTATTGTCTCAAACCTTACTTTTTTGAATGCTCCTGCTTATACTATCCACTCGGTTTATTGTAGCCGTGTGTACATTCATAAAGT
AACAGCTATTACTTCTCCGGAATCTCCTTATACCGTCGGCATTGTCCCTGATTCTTCTGATAATGTGTGCATCCAAGAATCTAGCA
TCAGCATGGGCTATGATGCCATTTCTTTAAAAAGTGGTTGGGACGAATACGGTTTATCGTATGCAAGACCTACTGCAAATGTCCAG
ATACAAAACGTTTACCTCAAGGCAGCTTCTGGTGCCTCTATTTCCTTTGGCAGTGAAATGTCTGGTGGCATATCTGATGTCGTGGT
CCGGGATGCTCACATACACAACTCGTTATCCGGAGTTGCCTTTAGAACAACAAAAGGAAGAGGGGGTTACATGAAAGAGATTGATG
TTTCAAACATCAACATGGTCAATGTTGGTACTGCGTTTCTAGCAAATGGTAGCTTTGGAACTCACCCGGATTCGGGTTTCGATGCA
AATGCTTACCCGCTAGTGAGTCACATCAGGTTACATGACATTGTTGGAGAGAACATAAGCGTTGCAGGAGAGTTCTTTGGGACTAA
AGAGTCTCCTTTCACTTCGGTTTTGCTATCGAATATCTCTCTGTCGATGAGCTCGGACTCTCCTGATGATGATGATGATTCTTGGC
AATGCTTGTATGTGGAGGGTTCTTCAGAATCAGTTGTACCTGAACCGTGCTTTGAGCTGAAGAGTTTTGAGAGTTCATACGGCAGA
GCTGTGGCCTTATGAGCATGTCTCCATGGTTCATATTTGTTTTGTTTAAGTTAGCAAAAAGGTCAGATTCTTTTTCTTCTTAAAAA
TAAACCCCATTGTTGATGTTATTTGCAGCTTGTGAGATTTATATATCTTGTACAGGTTCATTTGTTCATTCATGTGTAACCGAAAA
AAAAGTTTTGTTCAGTGGATATTCTTCATATGGCTTAAGAAAATATCTTTCAGTCACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002863973 polygalacturonase [Arabidopsis lyrata subsp. lyrata]19891e-220
NP_001032043 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana]19747e-219
NP_680409 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana]19622e-217
NP_850525 polygalacturonase-like protein [Arabidopsis thaliana]17382e-191
XP_002884608 glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp. lyrata]17372e-191

Swiss-Prot top hits (Blast detail)Scoree value
A7PZL3 Probable polygalacturonase10021e-107
P27644 Polygalacturonase1695e-011

TrEMBL top hits (Blast detail)Scoree value
Q2V302 Putative uncharacterized protein19744e-219
Q8RX04 Putative uncharacterized protein At5g4921519621e-217
Q8RWK6 Putative uncharacterized protein At3g0677017381e-191
Q8LAH2 Polygalacturonase-like protein15481e-169
Q9M7Y3 F3E22.9 protein15417e-169

Arabidopsis top hits (Blast detail)Scoree value
AT5G49215.2 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein19814e-222
AT5G49215.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein19699e-221
AT3G06770.2 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein17431e-194
AT3G06770.3 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein15503e-172
AT3G06770.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein15461e-171

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  17%
 
212  33%
 
62  33%
 
91  17%

Unigene MembersMember information