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Information for unigene UN27022
| FASTA Sequence |
| Unigene ID: UN27022 | Length: 1260 |
SSR | | CTCTCCTTTGTCCTAAATTCAGAATTGAAATAAAAGGAAGAAGAAGAAGAAGAATCCTGAGAAAAACGCACCCTTTTTACGATTAC
GCCGCCTTGTCTACGCCCTGACGAAATAGACTAAACGCCCGCTTCCTTCTCCCGAGCCAGAGCCAGAGCCAGAGCCTAAGTTCGAT
TCCTGGGGCAAAACTGATCTCAGCTTACCCCCAGTGACGCTGTCTCACTCCTCCGATCAAAAAAAGTTTTGCTCTTTTCGATTCCC
CGATCCTCCCGATGTCGAAAAGAATCCTTTGTAAGTTCTTTGCGCACGGAGCTTGCTTAAAAGGAGACAACTGTGAGTTCTCACAT
GACTGGAAGGATCCTTCAAATAATATTTGCACTTTCTACCAGAGAGGCAACTGCTCTTACGGAAGCAGATGCAGGTACGAACATGT
CAAACCTTCTCGCCCTCCTCCTGCTTCCTCCTCCGCTCTGCTGCCTCCTGGCACCTACCTATCTTCCGAAAGGGGTTTAACCTCAG
CCCCTTCTGCATCATCACCACCACCACCAGCGTGGACTTTGGATTCCTTAGACGACCAGGCCAACAACAACAACAACACTGGTCCA
ACCAACCCGGAAGACAAACCCATCTGCTCATACGCCGCAGCCGGAGACTGCCCACGCGGCGACCAGTGCCCTCACATCCACGGAGA
CCTCTGCCCGACCTGCGGCAAACGCTGCCTGCATCCTTTCAGACCAGAGGAGCGTGAGGACCACAAGAAAGCGTGCGAGAAGAAGC
ACAAGCAGCTCGAGGCGTTGAAGCTCAGCCAGGACGTGGAGTGCTGCGTCTGCTTGGAGCGTGTGCTCTCTAAACCCACTCCGGCC
GAGCGCAAGTTCGGGCTGCTCACCGAGTGCGATCACGCTTTCTGCATAGGTTGCATCAGGAACTGGCGCAGCAGCTCTCCTTCCAC
TGGGATGGATGTCAACAGCACGCTTAGAGCTTGCCCCATTTGCCGCAAGCTATCCTACTTCGTTGTCCCTAGTGTCATCTGGTTCT
CAGATCCTGAAGAGAAGAAGGAGATCATGGACAACTACAGGGACAAGCTCAGGTCAATTGATTGTAAGCACTTCAATTTTGGAGAT
GGGAACTGTCCGTTCGGAACAAGTTGCTTCTACAAGCATGCGTTTCATGATGGTCGTTTGGAGGAAGTGGTTCTAAGGCATCTGGA
TGCAGAAGATGGGCAGACTGTGATAGCTAAAGAGATAAGGTTGTCTGACTTTCTTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876728 hypothetical protein ARALYDRAFT_907942 [Arabidopsis lyrata subsp. lyrata] | 1187 | 8e-128 |
| ADM35936 CCCH-type zinc finger protein C3H69 [Arabidopsis thaliana] | 1185 | 1e-127 |
| XP_002884681 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 1163 | 5e-125 |
| XP_002526765 Makorin-1, putative [Ricinus communis] | 1058 | 7e-113 |
| XP_002279882 PREDICTED: hypothetical protein [Vitis vinifera] | 1030 | 1e-109 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6IDS6 E3 ubiquitin-protein ligase makorin | 1207 | 2e-131 |
| Q5ZA07 E3 ubiquitin-protein ligase makorin | 950 | 1e-101 |
| Q8JFF3 Probable E3 ubiquitin-protein ligase makorin-1 | 492 | 1e-048 |
| Q5NU14 Probable E3 ubiquitin-protein ligase makorin-1 | 492 | 1e-048 |
| Q9ERV1 Probable E3 ubiquitin-protein ligase makorin-2 | 492 | 1e-048 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9T2C7 Predicted protein (Fragment) | 1077 | 3e-115 |
| B9SL96 Makorin-1, putative | 1058 | 5e-113 |
| A5B1G2 Putative uncharacterized protein | 1016 | 4e-108 |
| B9HNN4 Predicted protein | 1006 | 5e-107 |
| B9GFP7 Predicted protein | 981 | 4e-104 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G08505.2 zinc finger (CCCH-type/C3HC4-type RING finger) family protein | 1210 | 6e-133 |
| AT3G08505.1 zinc finger (CCCH-type/C3HC4-type RING finger) family protein | 1210 | 6e-133 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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