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Information for unigene UN27033

FASTA Sequence
Unigene ID: UN27033Length: 1258 SSR 
TTTGATTTCAGAGACGTTTATTTGACGACAGAGAAAACACTATCCACCCACACAATTTTCTGGAGCTGGAAATAGAAAACAAAAGC
TTTGTTTTTTCCCCTTTTTTTTATTTCTGGGGGGTGTAGATAGAAAGATTGATCTGAAGCTAAAGAAGAAAATGGGAGAATCTGCA
GTTCTAGCTCATTCGTATTCCTTCGCAGCTCCTATTACCCATTCTGATTCTCATGAGGATAACACGATCCCTGCGCTTAGCCAATC
GATATCCTTTGGGAAGTTCATGAGTGAGGATCTCGAATGGGGAAAATGGTCTACCTTTTCGCACAAGAAGTACGTTGAAGAAGCTG
AGAAGTACTCTCGTCCTGGCTCCGTTGCTCAGAAGAAAGCTTTCTTCGAAGCTCACTACAAGCGTATAGCCGAAGCCAAGAAAGCT
GCAGCGGAAGAACAACCAACGGTCACGCCTGCCGAAGTTTTGCTCCACGCTTTGGAGACACAGCCTCCGTTGAGTTTGTTACCAGA
GGAAGAACCACTCGAAAGGAGAAGTATTCATAACCATGAAGACGTTCTTGTTCTTGTGGATGATGGTTCCTTGGAAGAGAAGAAGA
ATCAAGATGAAGAAGAGGTGGTGTTGAAAGAGGATTGCTCTGTTGATGAAAAGGAGAAGGCTAAAACAAAGAACAAACCGGTGTTT
AGATTGTCTCTGGAGAAGACAATCCCGCCTGCTAAATCTTTAGAGATTGCTTCATCAGATAAAACAAGTGAAAGACATCAGATGAT
TCAGAGTTCAGGGGTTCAACGCCAGAAATTCAGTTTCTTGAACTGTTTCATTGGTAATTCTAAAACTCGAGATCAGAGTCAAAACA
TGAGAAAGACGGAGAAGAAGAACCAAAAGAAGAAGCAGTTCATGTGTCTTTGTTTGAAACCAAAGACTATAAGAGAATCATAAGGA
AAGCAAAAAGAATACAACTTTGAAGCAAGCTCTACACAAGTCTGCAAAAATGGCAAATGGGAGAAATAAAAAGATTTGGACTTCAT
GGTTCGATCAAGCTACTTAAAGTGATTAAACCCAGAACGATTTTATTACCGTAGAATGGCCCCGATTATACTCTTTTATCACCAAT
TTTAAAGAGTCTGAGTGCATTAGGAAGAAGAAGAAGAAGAATAGCTTCTTTTGTTTAAGTCCTTTTGATCTCAGACTACTTATGTA
ATGAAAGAACAAGTCCGATTCTTTATTTGGTCTGAATATATTCATCTTTAAACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875381 hypothetical protein ARALYDRAFT_484524 [Arabidopsis lyrata subsp. lyrata]8436e-088
NP_566816 uncharacterized protein [Arabidopsis thaliana]8411e-087
AAM63218 unknown [Arabidopsis thaliana]8411e-087
NP_001189988 uncharacterized protein [Arabidopsis thaliana]8411e-087
NP_001189987 uncharacterized protein [Arabidopsis thaliana]6653e-067

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8LDH0 Putative uncharacterized protein8417e-088
Q9LTZ4 Gb|AAF01554.18417e-088
B3H4M9 Uncharacterized protein At5g40700.34196e-039
Q5PP69 At5g407004196e-039
Q9FM28 Dbj|BAA95710.14196e-039

Arabidopsis top hits (Blast detail)Scoree value
AT3G27350.1 unknown protein8414e-090
AT5G40700.1 unknown protein4193e-041
AT5G40700.2 unknown protein4193e-041
AT5G40700.3 unknown protein4193e-041
AT3G01710.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27350.1); Has 1029 Blast hits to 851 proteins in 111 species: Archae - 0; Bacteria - 24; Metazoa - 456; Fungi - 52; Plants - 192; Viruses - 7; Other Eukaryotes - 298 (source: NCBI BLink).2796e-025

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  20%
 
102  40%
 
191  20%
 
111  20%

Unigene MembersMember information