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Information for unigene UN27054

FASTA Sequence
Unigene ID: UN27054Length: 1333 SSR 
GGGAGAATTGCCCAATTTATAATAATTATTCTGTGACTTCTCTGTATACCAACATCCTTTAAACTAATAAGAAAACAACATTTGAT
ATATTATATATCTTGCAAGTTCCCCTCCAAACCCAAAGAGGAAGAAGAGAAACTTTCCACAGCATTTTCCCCAAAGAGCAAGTCTT
CTCCTTTGTGTCACCGAACTTTTACGCCAGATTCTGCCTTAAAAGCTTCCATCAAGACTTTACCTTTCGAAAGGATCCCCTGCCTC
AGCAGGATACTCAGGTACATCTACAGCCGCGTCAATCTTTTCCTTGAGATTGAACTTCTTGGCGATCATCGGCCTCACATCTTCAG
CTCCTATTAAGCTTTCAAGAAACGGCAGCAAGTGAAGTAGCTCTTTATATAACGGGTCGTTAAACCAGCTCTCTATTGGCACACCG
TTCTCCACTTGGAACCCAAATGCCTGTGGGGAGTTGTCGACGATGATCACACGAGATAAGTCACGCCCAAGGACAGACAAGTCCTT
GAGGTAGTTACCGTCAAAGAAAACACACGAGTCACGGTACACTCTATGGCGAAAGAGCTTCCTCTTGGGGTCAAGCACATTCAGAA
GCTGCTCGGCGTAGATACTCTGGCTAGCTGTGAATATAATGATCTCGAAAAGACGAGACACTCTCTCCATAAACTCTTGTAGGTGG
GGACGGCAACGCACGTACACCGTATGCTCTTCTTCGTTGAAATGCACAGGGAATGTGAAATCCACGTCATCACACGGTTCTAGAGT
AGAGTGCACAAGCGTTTCGTCGAGGTCTAGGACTAGAGAGATAGGAGGGCAGCTTCGGGTCTGTTTAGGAAGCAAGACGGGTATAA
AAGTAGGGACAACGGAGGACAGGTTGGGCAGGTTCTTGATGAAGAGATAAGGATCGAACTCATCGAGCTCCTCATCCTCTTCTTCG
TCCTCCACGTTGCATACGGAGGTGATGAGGGAATCTTGGTCACGCTCATCGACGCACTCCAGCTTCGAGCTCGCCGTCGTCATCGC
TAGATAAATAGCAGAAACCGAATCCAAGTTACGATTTGAATCAACGGAGTTTGATGTATCTAGAGCAAGCAATCGATCATAAGGGT
TCTGTGCATCCAAATCTCGAGAAGAATGGGAAGAAGAAGAAGCAGAACCATCGTCTTCCATTACAAACAACCTTGTAAAGGAACTC
TCTTTCACCCACGAAATGAGAAGAACCGGAGCTAAACTAGATCCAGACTCCGTAAAAGCTAGCTCGAACGCAAAGGATAATCTCCC
GATCAAAACGATTTCTTCCTTCTTCGTCTTCTCTCTCTCTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873535 NLI interacting factor family protein [Arabidopsis lyrata subsp. lyrata]14021e-152
NP_196747 SCP1-like small phosphatase 5 [Arabidopsis thaliana]13974e-152
XP_002271611 PREDICTED: hypothetical protein [Vitis vinifera]10831e-115
CBI27650 unnamed protein product [Vitis vinifera]10831e-115
XP_002514919 conserved hypothetical protein [Ricinus communis]10605e-113

Swiss-Prot top hits (Blast detail)Scoree value
Q54GB2 CTD small phosphatase-like protein 27072e-073
A4QNX6 CTD small phosphatase-like protein 2-B6183e-063
Q08BB5 CTD small phosphatase-like protein 2-A6158e-063
Q801R4 CTD small phosphatase-like protein 2-A6158e-063
Q66KM5 CTD small phosphatase-like protein 26158e-063

TrEMBL top hits (Blast detail)Scoree value
Q9LYI7 At5g1186013973e-152
B9RMF0 Putative uncharacterized protein10603e-113
B9GMJ1 Predicted protein (Fragment)10352e-110
C7EYT0 CTD phosphatase-like protein10012e-106
C7EYT1 CTD phosphatase-like protein10012e-106

Arabidopsis top hits (Blast detail)Scoree value
AT5G11860.1 NLI interacting factor (NIF) family protein13981e-154
AT5G11860.2 NLI interacting factor (NIF) family protein13981e-154
AT5G11860.3 NLI interacting factor (NIF) family protein13981e-154
AT5G11860.4 NLI interacting factor (NIF) family protein13981e-154
AT5G46410.1 NLI interacting factor (NIF) family protein6246e-065

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  100%

Unigene MembersMember information