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Information for unigene UN27102
| FASTA Sequence |
| Unigene ID: UN27102 | Length: 918 |
SSR | | GGAATGGCGTCCAGACGAAACGCAGGAAGCAATGAAGGGTTCAGGGAGAAATTTAACAGGGAGATTGGCTTCTCTCATCCGAGGTC
AATCTCTCGTCGAATCTGCGCCTCTGAGGTTCTCATTTTTCTCTCCTCACTTCTCGAAACTATTATCACTCTCTCTCTCTCTTGCT
TGTTTCCGTTTCCCGATAAGTCTTTTGACAACTCAGGGAGGGTAAAGTTTGGTTCTTTAATCGTGTACAAATTGTGGGTTTTGGAT
TGTTATGTCGTAAGTATCAGGAAGTCTTGTCATTGATCGTAGTTGGTCATCTCCAGGTAAAGAGTCTTGTGGTTGAGTGTCGAGCT
TCAAATGCTTTTTTTTTTAACAAATTGTAGTTTCTTGAGAACGAATCTTGAATCCAACACAACCACAAGTTGAAGTCTCTGTAGGA
CATTGAAGTGTATTGCTTTATTTTTTCTTTATGGCTACTTCAGGGGATAGTGAAGAAACTCGATCTTTACGGAAAGTTAAAAGGGC
ATGAAGGATGCGTTAATGCTGTGGAGTTCAGTTCCACTGGAGATATTCTTGTTTCGGGTTCCGATGATCGACAGATCATGCTCTGG
AACTTGTTGAATGGAACCAGGACGCTGGCTTATCCTTCCGGCCACTGTGAAAATGTGTTTCAGACTAAGTTCCTACCCTTCACAGA
TGACCGGACCATCATCACATCTGGTGCCGACGGACAAGTGAGACTTGGTCAGATACTAGAAAATGGTAAAGTGGAGACGAAAAGAC
TTGGGAGACACCGTGGTCGCGTCTACAAGCTTGCTCTTTCCCCTGGAGATCCTAACGTATTCTACAGCTGCGCCGAAGATGGTTTT
GTTCAACATGTTTGATCTCTCATTCATTCTCAGTGTGATCTTTTCATTTTCCAATCTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002875736 transducin family protein [Arabidopsis lyrata subsp. lyrata] | 655 | 2e-066 |
| NP_001190014 transducin/WD40 domain-containing protein [Arabidopsis thaliana] | 646 | 3e-065 |
| NP_190148 transducin/WD40 domain-containing protein [Arabidopsis thaliana] | 642 | 8e-065 |
| XP_002532257 WD-repeat protein, putative [Ricinus communis] | 538 | 9e-053 |
| XP_002284848 PREDICTED: hypothetical protein [Vitis vinifera] | 502 | 1e-048 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6NRH1 DDB1- and CUL4-associated factor 8-like protein 1 | 271 | 4e-023 |
| Q8N5D0 WD and tetratricopeptide repeats protein 1 | 268 | 8e-023 |
| Q80ZK9 WD and tetratricopeptide repeats protein 1 | 268 | 8e-023 |
| Q28I90 DDB1- and CUL4-associated factor 8-like protein 1 | 259 | 9e-022 |
| Q5TAQ9 DDB1- and CUL4-associated factor 8 | 258 | 1e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M1E5 Putative uncharacterized protein At3g45620 | 642 | 5e-065 |
| B9T1Y8 WD-repeat protein, putative | 538 | 6e-053 |
| C5WNL1 Putative uncharacterized protein Sb01g038680 | 438 | 2e-041 |
| A5BLC8 Putative uncharacterized protein | 437 | 3e-041 |
| Q8H000 Putative uncharacterized protein OSJNBa0013D02.2 | 431 | 2e-040 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G45620.1 transducin family protein / WD-40 repeat family protein | 642 | 3e-067 |
| AT4G35140.1 transducin family protein / WD-40 repeat family protein | 417 | 4e-041 |
| AT4G38480.1 transducin family protein / WD-40 repeat family protein | 405 | 9e-040 |
| AT5G10940.1 transducin family protein / WD-40 repeat family protein | 198 | 9e-016 |
| AT2G21390.1 coatomer protein complex, subunit alpha, putative | 114 | 5e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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