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Information for unigene UN27117
| FASTA Sequence |
| Unigene ID: UN27117 | Length: 1044 |
SSR | | GGCTCAACAACACTAATATTAAATAAAAGAAAAACTCAAAACACTAAAAATTAAAAACAAACGGTGATTAACAAAAGCTCTCTCTC
TCTACCGGCCCGCTTGAAACAGCAAGATGGGACTCCTCACAAGATGACCTCTTGAATCATCCCATTCCACTGAAGCCGACAAAATA
CCTCTCAAATTCTCTTCCATAACTCCATTAATCACAACCTTAAAGTGCTTCTCCTCTCCAGGCTTAACGAAACTCATAACCCTAGG
CTCCACTTCAACTCTCACTCCCTTCGGCGCCCAAACCTTAGCCACGTATGTCGACGGTCCGTATCCCACACTCCTCACCGTCCTGT
AAAAAAACCTCTGACACATTCGTTCCCGTGGAACCCACCTGCTTATGCATAGACGGATAATTTAAACCGTCAGATCCTAACCCTTG
CTTGTGATCCACGCATCTGTATTCCTTCTTAGTCTCGTTGCTGCCGCCAAGTAAAAGTCCAATGCTTGTGCTGTTATATCCTTCTT
TACATAGAAAACTTAAGTAAGCGCTCTCTGGAATGTCGTAGACTAGACCCGGGTGAATGGCTCTTCTCGGGTTTATTTGACCCGAT
CCGTAGCTTAGCTCCGCTTCGATGTCTTTGGTTCTCATTGGAGTAGCTGTTGTCATTAGGGCTGACTTGATTGAGGCTGGAGACCA
ATCAGGATGGAATGATTTGACATAAGCTGCTGCAGCTGCTGCGTGAGGACAAGCCATTGATGTTCCTGACATAATGGAGAATAGTG
TGTCTTCTGCATAAACCGTTACCGTTGCTATCTTCGAGTATGCAGCGAGAATGTTTAGTCCTGGTGCTGATATGTCAGGCTTGAGG
ATGTTGGGGCTGATTCTTTGAGGTCCTCTTGCTGAAAAGGAAGCAATGGAAGGAGCAACCATTTTGGATGTTCTCGTTTTAAAGAT
AACAGCTTGAGGATTTTTGGTGGAGTTGATGTAGTCAGAGATCTTTGTGCCGTCTTCGAAGAAGACATAAGAGCCAGGAATGAGAG
TTGAAGTGGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871048 subtilase family protein [Arabidopsis lyrata subsp. lyrata] | 1008 | 3e-107 |
| NP_568124 Subtilisin-like serine endopeptidase family protein [Arabidopsis thaliana] | 999 | 4e-106 |
| XP_002326417 predicted protein [Populus trichocarpa] | 809 | 4e-084 |
| XP_002533546 Xylem serine proteinase 1 precursor, putative [Ricinus communis] | 782 | 5e-081 |
| XP_002277106 PREDICTED: hypothetical protein [Vitis vinifera] | 715 | 3e-073 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LLL8 Xylem serine proteinase 1 | 537 | 6e-054 |
| Q39547 Cucumisin | 469 | 5e-046 |
| O65351 Subtilisin-like protease | 305 | 5e-027 |
| P29141 Minor extracellular protease vpr | 211 | 4e-016 |
| P27693 Alkaline protease | 124 | 5e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LZS6 Cucumisin-like protein | 999 | 3e-106 |
| B9MTQ5 Predicted protein | 809 | 3e-084 |
| B9T5M7 Xylem serine proteinase 1, putative | 782 | 4e-081 |
| B9RDI2 Xylem serine proteinase 1, putative | 566 | 4e-056 |
| B9GPT5 Predicted protein (Fragment) | 559 | 3e-055 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G03620.1 subtilase family protein | 999 | 1e-108 |
| AT4G00230.1 XSP1 (xylem serine peptidase 1); identical protein binding / serine-type endopeptidase | 537 | 5e-055 |
| AT5G59190.1 subtilase family protein | 487 | 3e-049 |
| AT5G59100.1 subtilase family protein | 467 | 7e-047 |
| AT3G46840.1 subtilase family protein | 449 | 9e-045 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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