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Information for unigene UN27140
| FASTA Sequence |
| Unigene ID: UN27140 | Length: 1178 |
SSR | | ATACTAACGTGTCATCTCCCTCCATTACACCTCACTTCCCGTCTTCTTCTCATCCACTAACCAACAACATTGTCATGTCGAAAGAT
CATCACCGTTGGATGGATCAGATCGCTTCATGGCAGTATTTCTCTTTAAACAACGATAAAGGTCACTACTATGCAAGTCAAGGAGA
AGAAGATATGAAAAACCCTAATCGATGTAATTGTAGCAACAGCAGCAAGAAAGAGAGGGGAGACTGTGGAAGCTGCAGAAACTCGT
TAAAAGCTTCGGTGTCCAGAGGACACTGGAGACCAGCTGAAGATGCTAAGCTGAAAGAACTAGTCGCGGTCTACGGCCCACAAAAC
TGGAACCTCATCGCTGAAAAGCTCCAAGGAAGATCTGGTAAGAGTTGTAGGCTACGATGGTTTAACCAACTAGACCCGAGGATAAA
CAGGAGAGCCTTCACGGAGGAAGAAGAGGAGAGGCTAATGCAAGCTCATAACCTTTATGGTAACAAATGGGCGATGATAGCAAGGC
TTTTCCCTGGAAGGACTGATAATTCTGTGAAGAACCATTGGCATGTTGTAATGGCTCGCAAGTTTAGAGAACAGTCTTCTGTTTAC
ACCAGGAGGAAGACGATGATTACTCATAAGCCACTCGTTAACCCCAATATTCACTCTTGCAATGATTTTGAACCTACTAGGTCAGA
TTTAATCCACCCTGTTGGCAATGACCAGAGCCACCTTATGTTACCCATTCCTTGCTTCTCAGGTTATGGTCATGGAATGTTTGAAA
ATCAAATGATGGTCGATGACTACTCTTCAAGGACACGAGAGGCTGCCACTAAATTCGATTTATTAAGCCAAACCGGGAAGTGTGAG
ATGCTTGATGAGAGCATGAGCGAGAAGAAGGAACCACACTTTTTCGATTTCCTTGGGTTGGGGACAGTGCGATTATCACCATGAAC
AAGAGAGAGAGAGAGAGATTAGGTTAGTTAACAAAAAGCAGGAGAAGATTCCGAGTCTATTCAATGTAGTTTCGTTGCGTTGATTA
ATAACCATTTGTAGATTAATTGTGTTAGTACCATGCAACATTCTTAAACTCGTGTTACTTTCGTACGTATCACTCTTTGGTTAATT
AAAGCTTTAATGTACATGCCATATTGTCTCTCTTTCAAAAGCAAAGTTGATTTGAAGTAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002887243 MYB105 [Arabidopsis lyrata subsp. lyrata] | 1074 | 9e-115 |
| NP_177115 myb domain protein 105 [Arabidopsis thaliana] | 1038 | 1e-110 |
| NP_001154369 myb domain protein 117 [Arabidopsis thaliana] | 657 | 2e-066 |
| NP_564261 myb domain protein 117 [Arabidopsis thaliana] | 657 | 2e-066 |
| ABK28416 unknown [Arabidopsis thaliana] | 657 | 2e-066 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FDW1 Transcription factor MYB44 | 337 | 1e-030 |
| Q08759 Transcriptional activator Myb | 324 | 4e-029 |
| P10243 Myb-related protein A | 322 | 6e-029 |
| P51960 Myb-related protein A | 322 | 6e-029 |
| P46200 Transcriptional activator Myb | 313 | 7e-028 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SEZ4 MYB-family transcription factor, putative | 1038 | 9e-111 |
| A0ME93 Putative uncharacterized protein (Fragment) | 657 | 1e-066 |
| Q9C5P9 MYB transcription factor | 657 | 1e-066 |
| Q9LQX5 T24P13.16 | 657 | 1e-066 |
| B9S8Y5 R2r3-myb transcription factor, putative | 607 | 9e-061 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G69560.1 MYB105 (myb domain protein 105); DNA binding / transcription factor | 1038 | 5e-113 |
| AT1G26780.1 myb family transcription factor (MYB117) | 657 | 8e-069 |
| AT1G26780.2 myb family transcription factor (MYB117) | 657 | 8e-069 |
| AT3G29020.1 MYB110 (myb domain protein 110); DNA binding / transcription factor | 494 | 6e-050 |
| AT3G29020.2 MYB110 (myb domain protein 110); DNA binding / transcription factor | 494 | 6e-050 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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